RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 FAM19A4Q96LR4 140 aa2.63□□□□□ -1.99
SMC4-218ENST00000486711 ALS2CR12Q96Q35 445 aa2.63□□□□□ -1.99
SMC4-218ENST00000486711 NAPGQ99747 312 aaPredicted RBP2.63□□□□□ -1.99
SMC4-218ENST00000486711 GABRG3Q99928 467 aa2.63□□□□□ -1.99
SMC4-218ENST00000486711 VCX3AQ9NNX9 186 aa2.63□□□□□ -1.99
SMC4-218ENST00000486711 TMEM100Q9NV29 134 aa2.63□□□□□ -1.99
SMC4-218ENST00000486711 KLF12Q9Y4X4 402 aa2.63□□□□□ -1.99
SMC4-218ENST00000486711 IGHV2OR16-5A0A0B4J2B6 119 aa2.62□□□□□ -1.99
SMC4-218ENST00000486711 GSTTP1A0A1W2PQM5 241 aa2.62□□□□□ -1.99
SMC4-218ENST00000486711 ISPDA4D126 451 aa2.62□□□□□ -1.99
SMC4-218ENST00000486711 POLR1CO15160 346 aaPredicted RBP2.62□□□□□ -1.99
SMC4-218ENST00000486711 TRAPPC6AO75865 159 aa2.62□□□□□ -1.99
SMC4-218ENST00000486711 PRSS3P35030 304 aa2.62□□□□□ -1.99
SMC4-218ENST00000486711 DEKP35659 375 aaKnown RBP2.62□□□□□ -1.99
SMC4-218ENST00000486711 PSMB2P49721 201 aa2.62□□□□□ -1.99
SMC4-218ENST00000486711 PPP1CAP62136 330 aa2.62□□□□□ -1.99
SMC4-218ENST00000486711 C6orf183Q5T699 404 aa2.62□□□□□ -1.99
SMC4-218ENST00000486711 FAM222AQ5U5X8 452 aa2.62□□□□□ -1.99
SMC4-218ENST00000486711 SLC25A34Q6PIV7 304 aa2.62□□□□□ -1.99
SMC4-218ENST00000486711 ASCL4Q6XD76 172 aa2.62□□□□□ -1.99
SMC4-218ENST00000486711 OR51A7Q8NH64 312 aa2.62□□□□□ -1.99
SMC4-218ENST00000486711 S4R3C0 116 aa2.62□□□□□ -1.99
SMC4-218ENST00000486711 V9GYY9 64 aa2.62□□□□□ -1.99
SMC4-218ENST00000486711 DOCK9Q9BZ29 2069 aa2.62□□□□□ -1.99
SMC4-218ENST00000486711 TRAV8-6A0A0B4J262 113 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 IGKV6-21A0A0C4DH24 114 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 E7EWF7 191 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 RPL36A-HNRNPH2H7BZ11 118 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 GATCO43716 136 aaKnown RBP2.61□□□□□ -1.99
SMC4-218ENST00000486711 CCDC22O60826 627 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 S100A9P06702 114 aaKnown RBP2.61□□□□□ -1.99
SMC4-218ENST00000486711 OR5AL1P0C617 328 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 HTR2CP28335 458 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 GNRHRP30968 328 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 RPL31P62899 125 aaKnown RBP2.61□□□□□ -1.99
SMC4-218ENST00000486711 ZNF616Q08AN1 781 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 ADIGQ0VDE8 80 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 MAPRE2Q15555 327 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 LY6EQ16553 131 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 HHATQ5VTY9 493 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 OSR2Q8N2R0 312 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 PDCL2Q8N4E4 241 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 ZNF561Q8N587 486 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 TMEM105Q8N8V8 129 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 CYB561A3Q8NBI2 242 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 OR2Z1Q8NG97 314 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 ZFAND1Q8TCF1 268 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 CPNE4Q96A23 557 aaPredicted RBP2.61□□□□□ -1.99
SMC4-218ENST00000486711 SMARCD1Q96GM5 515 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 C18orf15Q96N68 181 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 ZNF2Q9BSG1 426 aaPredicted RBP2.61□□□□□ -1.99
SMC4-218ENST00000486711 MARVELD1Q9BSK0 173 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 CHID1Q9BWS9 393 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 STMN4Q9H169 189 aaPredicted RBP2.61□□□□□ -1.99
SMC4-218ENST00000486711 ANKHQ9HCJ1 492 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 CSNK1G1Q9HCP0 422 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 RAB23Q9ULC3 237 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 JCADQ9P266 1359 aa2.61□□□□□ -1.99
SMC4-218ENST00000486711 NPHP4O75161 1426 aaPredicted RBP2.6□□□□□ -1.99
SMC4-218ENST00000486711 BTNL10A8MVZ5 291 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 A8MWL6 223 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 NDUFS8O00217 210 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 RFXANKO14593 260 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 PRMT5O14744 637 aaPredicted RBP2.6□□□□□ -1.99
SMC4-218ENST00000486711 GMDSO60547 372 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 ALOX12BO75342 701 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 MAS1P04201 325 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 TPM1P09493 284 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 CD9P21926 228 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 MLF1P58340 268 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 TAS2R43P59537 309 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 IFFO1Q0D2I5 559 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 LAMTOR4Q0VGL1 99 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 FUT5Q11128 374 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 TRDNQ13061 729 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 SHHQ15465 462 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 NDUFAF6Q330K2 333 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 FAM27D1Q5T7N8 215 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 KDM4DQ6B0I6 523 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 C16orf87Q6PH81 154 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 SPANXA2-OT1Q8N9U9 137 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 OR5M1Q8NGP8 315 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 OR6N2Q8NGY6 317 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 NDNFQ8TB73 568 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 GPR82Q96P67 336 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 TBL1XR1Q9BZK7 514 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 ZSCAN16Q9H4T2 348 aaPredicted RBP2.6□□□□□ -1.99
SMC4-218ENST00000486711 TAS2R5Q9NYW4 299 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 VAX2Q9UIW0 290 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 SLC7A11Q9UPY5 501 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 ENPP4Q9Y6X5 453 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 NUP214P35658 2090 aaPredicted RBP2.6□□□□□ -1.99
SMC4-218ENST00000486711 SYNRGQ9UMZ2 1314 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 CABIN1Q9Y6J0 2220 aa2.6□□□□□ -1.99
SMC4-218ENST00000486711 ANKRD20A5PA0PJZ0 165 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 J3QT63 122 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 SPOPO43791 374 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 CDRT1O95170 752 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 IGLV2-8P01709 118 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 BTN1A1Q13410 526 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms