RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 IKZF1Q13422 519 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 TMED1Q13445 227 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 KLF17Q5JT82 389 aaPredicted RBP10.71□□□□□ -0.69
CHMP3-208ENST00000486404 WDR38Q5JTN6 314 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 ZNF684Q5T5D7 378 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 GPR157Q5UAW9 335 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 C12orf54Q6X4T0 127 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 ZNF841Q6ZN19 808 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 MOB3CQ70IA8 216 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 C11orf53Q8IXP5 236 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 FAM216BQ8N7L0 139 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 SCCPDHQ8NBX0 429 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 OR2T27Q8NH04 317 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 CCL13Q99616 98 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 PCGF1Q9BSM1 259 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 USE1Q9NZ43 259 aa10.71□□□□□ -0.69
CHMP3-208ENST00000486404 MRM2Q9UI43 246 aaKnown RBP10.71□□□□□ -0.69
CHMP3-208ENST00000486404 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.71□□□□□ -0.69
CHMP3-208ENST00000486404 A0A1B0GVI7 797 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 A0A1W2PQL4 384 aaPredicted RBP10.7□□□□□ -0.7
CHMP3-208ENST00000486404 SNTNA6NMZ2 147 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 ZNF879B4DU55 563 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 ZNF732B4DXR9 585 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 P2RY10O00398 339 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 AKR7A2O43488 359 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 NDUFB3O43676 98 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 ECDO95905 644 aaPredicted RBP10.7□□□□□ -0.7
CHMP3-208ENST00000486404 TTRP02766 147 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 LIPFP07098 398 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 ACTC1P68032 377 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 ACTA1P68133 377 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 BAMBIQ13145 260 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 ODF4Q2M2E3 257 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 CEACAM21Q3KPI0 293 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 ZIK1Q3SY52 487 aaPredicted RBP10.7□□□□□ -0.7
CHMP3-208ENST00000486404 LRRC10Q5BKY1 277 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 BTN2A1Q7KYR7 527 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 DOK3Q7L591 496 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 ELMOD2Q8IZ81 293 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 CBR4Q8N4T8 237 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 FAM216AQ8WUB2 273 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 GCDHQ92947 438 aaPredicted RBP10.7□□□□□ -0.7
CHMP3-208ENST00000486404 STMN2Q93045 179 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 DACT3Q96B18 629 aaPredicted RBP10.7□□□□□ -0.7
CHMP3-208ENST00000486404 C9orf16Q9BUW7 83 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 RASSF4Q9H2L5 321 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 ZMAT3Q9HA38 289 aaKnown RBP10.7□□□□□ -0.7
CHMP3-208ENST00000486404 SNTG1Q9NSN8 517 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 KAAG1Q9UBP8 84 aa10.7□□□□□ -0.7
CHMP3-208ENST00000486404 DNAJC9-AS1A6NH13 148 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 METTL15A6NJ78 407 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.69□□□□□ -0.7
CHMP3-208ENST00000486404 SRSF10O75494 262 aaKnown RBP10.69□□□□□ -0.7
CHMP3-208ENST00000486404 TOX4O94842 621 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 NRASP01111 189 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 IGLV3-1P01715 115 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 GLRA1P23415 457 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 CFHR2P36980 270 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 UBA52P62987 128 aaKnown RBP10.69□□□□□ -0.7
CHMP3-208ENST00000486404 CLVS2Q5SYC1 327 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 STUMQ69YW2 141 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 HAGHLQ6PII5 290 aaPredicted RBP10.69□□□□□ -0.7
CHMP3-208ENST00000486404 SSX6Q7RTT6 188 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 OR5T2Q8NGG2 359 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 OR5A2Q8NGI9 324 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 TRUB1Q8WWH5 349 aaKnown RBP10.69□□□□□ -0.7
CHMP3-208ENST00000486404 H1FXQ92522 213 aaKnown RBP10.69□□□□□ -0.7
CHMP3-208ENST00000486404 EME1Q96AY2 570 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 TMIGD2Q96BF3 282 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 SEH1LQ96EE3 360 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 ADI1Q9BV57 179 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 FGF23Q9GZV9 251 aaPredicted RBP10.69□□□□□ -0.7
CHMP3-208ENST00000486404 WDR13Q9H1Z4 485 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 GPR173Q9NS66 373 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 ONECUT1Q9UBC0 465 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 NLKQ9UBE8 527 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 GNG8Q9UK08 70 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 GMPPBQ9Y5P6 360 aa10.69□□□□□ -0.7
CHMP3-208ENST00000486404 A0A1B0GW55 424 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 DHRS7CA6NNS2 312 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 SYT7O43581 403 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 SULT1C4O75897 302 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 PLATP00750 562 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 SFTPBP07988 381 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 DUX4L2P0CJ85 424 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 DUX4L3P0CJ86 424 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 DUX4L4P0CJ87 422 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 DUX4L5P0CJ88 424 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 DUX4L6P0CJ89 424 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 DUX4L7P0CJ90 424 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 IL13RA1P78552 427 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 SMIM21Q3B7S5 101 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 C11orf91Q3C1V1 193 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 DMRTC1Q5HYR2 192 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 MEDAGQ5VYS4 303 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 DUX4L9Q6RFH8 374 aaPredicted RBP10.68□□□□□ -0.7
CHMP3-208ENST00000486404 BRD3OSQ6XYD6 125 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 CATSPERDQ86XM0 798 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 CMTM4Q8IZR5 234 aa10.68□□□□□ -0.7
CHMP3-208ENST00000486404 BCL6BQ8N143 479 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms