RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 PATE4P0C8F1 98 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 CD37P11049 281 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 PSKH1P11801 424 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 IL7P13232 177 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 PITPNBP48739 271 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 PDLIM4P50479 330 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 PSMA6P60900 246 aaKnown RBP8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 UBE2NP61088 152 aaKnown RBP8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 HIST1H3AP68431 136 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 ECH1Q13011 328 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 TAF13Q15543 124 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 CEACAM16Q2WEN9 425 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 UBE2NLQ5JXB2 153 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 BCL2L15Q5TBC7 163 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 HIST2H3PS2Q5TEC6 136 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 FAM27BQ5VT28 67 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 HIST2H3AQ71DI3 136 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 SSX8Q7RTT4 187 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 SYT9Q86SS6 491 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 LRRTM1Q86UE6 522 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 MDP1Q86V88 176 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 ELMOD2Q8IZ81 293 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 SAMD12Q8N8I0 201 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 GJC3Q8NFK1 279 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 FGFBP3Q8TAT2 258 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 ZNF671Q8TAW3 534 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 TSEN15Q8WW01 171 aaKnown RBP8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 RAB40AQ8WXH6 277 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 TMEM158Q8WZ71 300 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 TMEM106AQ96A25 262 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 FOXRED1Q96CU9 486 aaPredicted RBP8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 ULBP2Q9BZM5 246 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 LINC00470Q9BZP3 86 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 SHARPINQ9H0F6 387 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 PLK3Q9H4B4 646 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 BRD7Q9NPI1 651 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 G6PC2Q9NQR9 355 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 CENPMQ9NSP4 180 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 DDX28Q9NUL7 540 aaKnown RBP8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 EXTL2Q9UBQ6 330 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 NUFIP1Q9UHK0 495 aaKnown RBP8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 CDC42EP3Q9UKI2 254 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 FZR1Q9UM11 496 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 LHFPL6Q9Y693 200 aa8.04□□□□□ -1.12
TMEM39A-208ENST00000486159 IGHV2OR16-5A0A0B4J2B6 119 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 SMIM30A4D0T7 59 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 ANXA2P2A6NMY6 339 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 CTDSPLO15194 276 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 SULT1B1O43704 296 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 UBL3O95164 117 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 PNPP00491 289 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 TGFAP01135 160 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 IGKV3-15P01624 115 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 HLA-HP01893 362 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 CRYAAP02489 173 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 ANXA2P07355 339 aaKnown RBP8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 SLC2A2P11168 524 aaPredicted RBP8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 CBR1P16152 277 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 ATF1P18846 271 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 ELK1P19419 428 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 HSD11B1P28845 292 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 MNDAP41218 407 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 RPS27P42677 84 aaKnown RBP8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 OR10A3P58181 314 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 SNRPD2P62316 118 aaKnown RBP8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 MRPS10P82664 201 aaKnown RBP8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 RELBQ01201 579 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 IL18Q14116 193 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 TRIQKQ629K1 86 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 GLT8D1Q68CQ7 371 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 MZT2BQ6NZ67 158 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 LRP11Q86VZ4 500 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 LINC00346Q8IVM7 164 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 CDH26Q8IXH8 852 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 GPR137CQ8N3F9 429 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 Q8N402 240 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 NKAIN3Q8N8D7 197 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 C19orf18Q8NEA5 215 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 ITFG2Q969R8 447 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 ZNF75AQ96N20 296 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 PIMREGQ9BSJ6 248 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 SLC22A4Q9H015 551 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 ABCG5Q9H222 651 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 CRLF2Q9HC73 371 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 FAM206AQ9NX38 181 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 ZNF224Q9NZL3 707 aa8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 MYEF2Q9P2K5 600 aaKnown RBP8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 AK6Q9Y3D8 172 aaKnown RBP8.03□□□□□ -1.12
TMEM39A-208ENST00000486159 A0A1W2PPK0 400 aa8.02□□□□□ -1.13
TMEM39A-208ENST00000486159 B9A039 149 aa8.02□□□□□ -1.13
TMEM39A-208ENST00000486159 RPL36A-HNRNPH2H7BZ11 118 aa8.02□□□□□ -1.13
TMEM39A-208ENST00000486159 WNT9BO14905 357 aa8.02□□□□□ -1.13
TMEM39A-208ENST00000486159 ERCC1P07992 297 aaPredicted RBP8.02□□□□□ -1.13
TMEM39A-208ENST00000486159 CST2P09228 141 aa8.02□□□□□ -1.13
TMEM39A-208ENST00000486159 CSF3P09919 207 aa8.02□□□□□ -1.13
TMEM39A-208ENST00000486159 DAOP14920 347 aa8.02□□□□□ -1.13
TMEM39A-208ENST00000486159 IGFBP3P17936 291 aaPredicted RBP8.02□□□□□ -1.13
TMEM39A-208ENST00000486159 RBMXP38159 391 aaKnown RBP8.02□□□□□ -1.13
TMEM39A-208ENST00000486159 INPP1P49441 399 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms