RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 COL8A2P25067 703 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 ACKR3P25106 362 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 NR4A2P43354 598 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 ATP1B3P54709 279 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 MVKQ03426 396 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 TNK1Q13470 666 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 RIN1Q13671 783 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 CDK5R1Q15078 307 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 UTS2BQ765I0 119 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 MOGAT3Q86VF5 341 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 PRIMA1Q86XR5 153 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 RDH10Q8IZV5 341 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 DNAAF1Q8NEP3 725 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 OR10Z1Q8NGY1 313 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 OR14K1Q8NGZ2 314 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 Q8TCH9 128 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 PPP1R14AQ96A00 147 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 FGGYQ96C11 551 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 RAB39BQ96DA2 213 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 ZNF649Q9BS31 505 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 PCDHB16Q9NRJ7 776 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 RASL12Q9NYN1 266 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 LRCH1Q9Y2L9 728 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 NPTNQ9Y639 398 aa7□□□□□ -1.29
SF3A1-208ENST00000485618 FLNAP21333 2647 aaKnown RBP6.99□□□□□ -1.29
SF3A1-208ENST00000485618 PPIAL4EA0A075B759 164 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 TRAV38-1A0A0B4J264 116 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 ISPDA4D126 451 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 C5orf63A6NC05 138 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 ZNF732B4DXR9 585 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 PPIAL4DF5H284 164 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 H0YL77 283 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 PLPP2O43688 288 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 LILRA1O75019 489 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 ALX3O95076 343 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 PTBP3O95758 552 aaKnown RBP6.99□□□□□ -1.29
SF3A1-208ENST00000485618 MT-ND2P03891 347 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 HSMCR30P0CW71 290 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 PPIAL4FP0DN26 164 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 RAB3AP20336 220 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 PCMT1P22061 227 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 CFHR2P36980 270 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 MDH2P40926 338 aaKnown RBP6.99□□□□□ -1.29
SF3A1-208ENST00000485618 KIR3DL2P43630 455 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 RBP2P50120 134 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 GPM6AP51674 278 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 NANOS3P60323 173 aaKnown RBP6.99□□□□□ -1.29
SF3A1-208ENST00000485618 BTG1P62324 171 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 LOXL1Q08397 574 aaPredicted RBP6.99□□□□□ -1.29
SF3A1-208ENST00000485618 TBCEQ15813 527 aaPredicted RBP6.99□□□□□ -1.29
SF3A1-208ENST00000485618 MICBQ29980 383 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 KCTD21Q4G0X4 260 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 FAM76BQ5HYJ3 339 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 CEP78Q5JTW2 689 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 TMEM42Q69YG0 159 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 DMKNQ6E0U4 476 aaPredicted RBP6.99□□□□□ -1.29
SF3A1-208ENST00000485618 FIP1L1Q6UN15 594 aaKnown RBP6.99□□□□□ -1.29
SF3A1-208ENST00000485618 DNM1P46Q6ZS02 220 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 LHFPL2Q6ZUX7 228 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 NLRC3Q7RTR2 1065 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 ZNF367Q7RTV3 350 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 MKXQ8IYA7 352 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 CIARTQ8N365 385 aaPredicted RBP6.99□□□□□ -1.29
SF3A1-208ENST00000485618 PARP16Q8N5Y8 322 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 OR1M1Q8NGA1 313 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 PHYHIPQ92561 330 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 GTF3AQ92664 365 aaKnown RBP6.99□□□□□ -1.29
SF3A1-208ENST00000485618 ITPKCQ96DU7 683 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 BORCS8Q96FH0 119 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 MDFIQ99750 246 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 PDCD1LG2Q9BQ51 273 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 SOX7Q9BT81 388 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 CHST5Q9GZS9 411 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 SLITRK2Q9H156 845 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 ZCCHC4Q9H5U6 513 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 C1orf123Q9NWV4 160 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 GLS2Q9UI32 602 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 PPIAL4AQ9Y536 164 aa6.99□□□□□ -1.29
SF3A1-208ENST00000485618 IGHV4-30-2A0A087WSY4 118 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 A0A087WXM4 84 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 FAM230AA0A1W2PPH8 454 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 MEGF11A6BM72 1044 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 RNF223E7ERA6 249 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 E9PI62 339 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 TMEM178BH3BS89 294 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 RP2O75695 350 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 NCR1O76036 304 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 LY6HO94772 140 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 HCKP08631 526 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 MUC1P15941 1255 aaPredicted RBP6.98□□□□□ -1.29
SF3A1-208ENST00000485618 ATF1P18846 271 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 GZMKP49863 264 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 BMXP51813 675 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 GTF2A1P52655 376 aaPredicted RBP6.98□□□□□ -1.29
SF3A1-208ENST00000485618 MTCP1P56278 107 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 PRSS12P56730 875 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 MLLT11Q13015 90 aaPredicted RBP6.98□□□□□ -1.29
SF3A1-208ENST00000485618 MAB21L1Q13394 359 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 IRF3Q14653 427 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 Q499Y3 187 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms