RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 TOR3AQ9H497 397 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 METTL8Q9H825 291 aaKnown RBP10.65□□□□□ -0.7
HDAC6-227ENST00000485102 SP140LQ9H930 580 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 SIRT7Q9NRC8 400 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 HAO2Q9NYQ3 351 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 ONECUT1Q9UBC0 465 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 DUX4Q9UBX2 424 aa10.65□□□□□ -0.7
HDAC6-227ENST00000485102 SNTNA6NMZ2 147 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 RIIAD1A6NNX1 92 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 ZNF878C9JN71 531 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 G3V4G9 280 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 PAHP00439 452 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 PSKH1P11801 424 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 ZNF3P17036 446 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 CFL1P23528 166 aaKnown RBP10.64□□□□□ -0.71
HDAC6-227ENST00000485102 GABRA5P31644 462 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 PYCR1P32322 319 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 SAA4P35542 130 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 SLC15A1P46059 708 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 ENTPD1P49961 510 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 CAV3P56539 151 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 GRB2P62993 217 aaKnown RBP10.64□□□□□ -0.71
HDAC6-227ENST00000485102 SLC34A1Q06495 639 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 SNCBQ16143 134 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 HIST2H2BDQ6DRA6 164 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 Q6ZPA2 131 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 ZNF788Q6ZQV5 615 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 PRSS45Q7RTY3 260 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 FAM216BQ8N7L0 139 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 CSNK2A3Q8NEV1 391 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 PROKR2Q8NFJ6 384 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 OR52H1Q8NGJ2 320 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 PPP1R14AQ96A00 147 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 SGK3Q96BR1 496 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 SLAMF6Q96DU3 332 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 MED30Q96HR3 178 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 NIPSNAP1Q9BPW8 284 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 TSSK6Q9BXA6 273 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 NMNAT2Q9BZQ4 307 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 FAM234AQ9H0X4 552 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 MEGF9Q9H1U4 602 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 RANBP3Q9H6Z4 567 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-227ENST00000485102 VNN3Q9NY84 501 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 MAB21L2Q9Y586 359 aa10.64□□□□□ -0.71
HDAC6-227ENST00000485102 hCG_38984A0A1B0GV85 526 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 MEIOCA2RUB1 952 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 ANKRD61A6NGH8 418 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 TVP23AA6NH52 213 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 ZNF593O00488 134 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-227ENST00000485102 MPZL2O60487 215 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 APOC1P02654 83 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 SLC2A1P11166 492 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 FMO3P31513 532 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 CRISP1P54107 249 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 CSNK2BP67870 215 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 TAF13Q15543 124 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 CRIP3Q6Q6R5 217 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 ZNF555Q8NEP9 628 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 OR9Q1Q8NGQ5 310 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 TRUB1Q8WWH5 349 aaKnown RBP10.63□□□□□ -0.71
HDAC6-227ENST00000485102 ITPKCQ96DU7 683 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 MYCBPQ99417 103 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-227ENST00000485102 CIB1Q99828 191 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 PPA2Q9H2U2 334 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 RGCCQ9H4X1 137 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 SLC25A19Q9HC21 320 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 CENPMQ9NSP4 180 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 MPC1Q9Y5U8 109 aa10.63□□□□□ -0.71
HDAC6-227ENST00000485102 TMEM210A6NLX4 147 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 ANKRD65E5RJM6 399 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 H0YJX3 145 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 CDIPTO14735 213 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 CASQ2O14958 399 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-227ENST00000485102 ALX3O95076 343 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 ALPLP05186 524 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 POU1F1P28069 291 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 HSPA13P48723 471 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 DAPP51397 102 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 SLC25A1P53007 311 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 CDC42P60953 191 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 IL5RAQ01344 420 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 PPP1R8Q12972 351 aaKnown RBP10.62□□□□□ -0.71
HDAC6-227ENST00000485102 TIGD6Q17RP2 521 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 KLHL12Q53G59 568 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 TTC23Q5W5X9 447 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 LYPD4Q6UWN0 246 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 KRT74Q7RTS7 529 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 TMEM179BQ7Z7N9 219 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 FTMTQ8N4E7 242 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 CBR4Q8N4T8 237 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 SLC37A3Q8NCC5 494 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 ANGPTL6Q8NI99 470 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 PPP1R35Q8TAP8 253 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 RNF133Q8WVZ7 376 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 SEH1LQ96EE3 360 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 REEP6Q96HR9 211 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 AJUBAQ96IF1 538 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 MICU1Q9BPX6 476 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 GABARAPL3Q9BY60 117 aa10.62□□□□□ -0.71
HDAC6-227ENST00000485102 RAB18Q9NP72 206 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms