RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 VKORC1L1Q8N0U8 176 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 CNPY4Q8N129 248 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 COMMD1Q8N668 190 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 ENKURQ8TC29 256 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 ACTL9Q8TC94 416 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 RXFP4Q8TDU9 374 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 GLYATL2Q8WU03 294 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 RAB1CQ92928 201 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 OTUB2Q96DC9 234 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 GSDMAQ96QA5 445 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 OR4K3Q96R72 315 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 KCNS3Q9BQ31 491 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 AGMATQ9BSE5 352 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 MTG1Q9BT17 334 aaPredicted RBP0.89□□□□□ -2.27
VPS50-216ENST00000484954 OR2AG1Q9H205 316 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 SND1-IT1Q9HBX3 110 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 HMGXB4Q9UGU5 601 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 SAR1BQ9Y6B6 198 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 MROH7Q68CQ1 1323 aa0.89□□□□□ -2.27
VPS50-216ENST00000484954 GOLGA6L7A0A1B0GV03 622 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 SLC22A20A6NK97 555 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 GOLGA8TH3BQL2 631 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 AKR7A2O43488 359 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 CATP04040 527 aaKnown RBP0.88□□□□□ -2.27
VPS50-216ENST00000484954 KRT16P08779 473 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 MMP7P09237 267 aaPredicted RBP0.88□□□□□ -2.27
VPS50-216ENST00000484954 NELFEP18615 380 aaKnown RBP0.88□□□□□ -2.27
VPS50-216ENST00000484954 CXCR1P25024 350 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 OR1G1P47890 313 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 PCOTHQ58A44 107 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 STEAP4Q687X5 459 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 OR2T5Q6IEZ7 315 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 SLC26A10Q8NG04 563 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 OR52K2Q8NGK3 314 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 OR4C13Q8NGP0 309 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 OR2T29Q8NH02 315 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 GPX8Q8TED1 209 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 CDS1Q92903 461 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 RERGQ96A58 199 aaPredicted RBP0.88□□□□□ -2.27
VPS50-216ENST00000484954 SMARCD1Q96GM5 515 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 JSRP1Q96MG2 331 aaPredicted RBP0.88□□□□□ -2.27
VPS50-216ENST00000484954 OPALINQ96PE5 141 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 OR2V2Q96R30 315 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 PIGUQ9H490 435 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 C8orf33Q9H7E9 229 aaPredicted RBP0.88□□□□□ -2.27
VPS50-216ENST00000484954 MRM3Q9HC36 420 aaKnown RBP0.88□□□□□ -2.27
VPS50-216ENST00000484954 CD209Q9NNX6 404 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 ZNF302Q9NR11 478 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 DYRK4Q9NR20 520 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 CA10Q9NS85 328 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 RHBDD3Q9Y3P4 386 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 HES2Q9Y543 173 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 OR51B2Q9Y5P1 312 aa0.88□□□□□ -2.27
VPS50-216ENST00000484954 IGHV6-1A0A0B4J1U7 121 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 A0A0B4J2E0 115 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 IGKV1-6A0A0C4DH72 117 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 A0A1W2PRD5 423 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 GOLGA6L4A6NEF3 574 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 CENPBD1B2RD01 187 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 SUPT3HB4E1H0 165 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 LINC01619G3V211 115 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 C15orf65H3BRN8 121 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 M0R1X1 148 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 HMMRO75330 724 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 MPDU1O75352 247 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 CPSF4O95639 269 aaKnown RBP0.87□□□□□ -2.27
VPS50-216ENST00000484954 NRASP01111 189 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 HRASP01112 189 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 KRASP01116 189 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 IGKV1-39P01597 117 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 IGKV1D-39P04432 117 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 KLK1P06870 262 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 RAB5AP20339 215 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 CFHR2P36980 270 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 TGM4P49221 684 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 KLF3P57682 345 aaPredicted RBP0.87□□□□□ -2.27
VPS50-216ENST00000484954 DAOAP59103 153 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 IL5RAQ01344 420 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 IFITM3Q01628 133 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 SPAG1Q07617 926 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 IL18Q14116 193 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 TSC22D1Q15714 1073 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 KRTAP25-1Q3LHN0 102 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 LINC00303Q3SY05 128 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 HIKESHIQ53FT3 197 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 BEX5Q5H9J7 111 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 OPN5Q6U736 354 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 TMPPEQ6ZT21 453 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 UNC93AQ86WB7 457 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 RAB43Q86YS6 212 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 CMTM8Q8IZV2 173 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 TRAM1L1Q8N609 369 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 SLC25A29Q8N8R3 303 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 PROKR2Q8NFJ6 384 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 OR52N1Q8NH53 320 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 AGR3Q8TD06 166 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 RXFP2Q8WXD0 754 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 NAT6Q93015 286 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 APH1AQ96BI3 265 aa0.87□□□□□ -2.27
VPS50-216ENST00000484954 C9orf72Q96LT7 481 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms