RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TTRP02766 147 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 ISG15P05161 165 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 UBCP0CG48 685 aaKnown RBP8.36□□□□□ -1.07
CPSF4-213ENST00000484112 PPIAL4FP0DN26 164 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 ANOS1P23352 680 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 CAPGP40121 348 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 ZNF85Q03923 595 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 HNRNPA0Q13151 305 aaKnown RBP8.36□□□□□ -1.07
CPSF4-213ENST00000484112 GALEQ14376 348 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 LRRC36Q1X8D7 754 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 GFOD2Q3B7J2 385 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 C11orf91Q3C1V1 193 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 SSX6Q7RTT6 188 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 THAP5Q7Z6K1 395 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 MOGAT3Q86VF5 341 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 COMMD2Q86X83 199 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 CATSPERDQ86XM0 798 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 ZDHHC23Q8IYP9 409 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 OR10Z1Q8NGY1 313 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 OR51E1Q8TCB6 317 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 APH1BQ8WW43 257 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 RORBQ92753 470 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 LGALS12Q96DT0 336 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 ITPKCQ96DU7 683 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 LYZL4Q96KX0 146 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 GPR84Q9NQS5 396 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 MMP26Q9NRE1 261 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 RNF7Q9UBF6 113 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 NUP50Q9UKX7 468 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 RHBDD3Q9Y3P4 386 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 AUP1Q9Y679 476 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 V9GYS6 101 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 MGAM2Q2M2H8 2515 aa8.36□□□□□ -1.07
CPSF4-213ENST00000484112 ARHGAP32A7KAX9 2087 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 IGHV3OR16-10A0A075B7F0 116 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 WBP4O75554 376 aaKnown RBP8.35□□□□□ -1.07
CPSF4-213ENST00000484112 ACKR3P25106 362 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 DCKP27707 260 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 RBMXP38159 391 aaKnown RBP8.35□□□□□ -1.07
CPSF4-213ENST00000484112 CSNK2BP67870 215 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 IL13RA1P78552 427 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 MFGE8Q08431 387 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-213ENST00000484112 PRDX4Q13162 271 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 MED21Q13503 144 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 CEACAM21Q3KPI0 293 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 ZNF404Q494X3 552 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 SPRNQ5BIV9 151 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 TMEM244Q5VVB8 128 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 C8orf59Q8N0T1 100 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-213ENST00000484112 DEFB108BQ8NET1 73 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 OR1M1Q8NGA1 313 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 OR5A2Q8NGI9 324 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 CYGBQ8WWM9 190 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 OR5P3Q8WZ94 311 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 SLC25A28Q96A46 364 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 C12orf43Q96C57 262 aaKnown RBP8.35□□□□□ -1.07
CPSF4-213ENST00000484112 C1orf147Q96MC9 270 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-213ENST00000484112 ZNF48Q96MX3 618 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-213ENST00000484112 TBX5Q99593 518 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 MS4A7Q9GZW8 240 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-213ENST00000484112 PATZ1Q9HBE1 687 aaKnown RBP8.35□□□□□ -1.07
CPSF4-213ENST00000484112 FGF20Q9NP95 211 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-213ENST00000484112 MIOXQ9UGB7 285 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 GNG8Q9UK08 70 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 SLC22A13Q9Y226 551 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 LRCH1Q9Y2L9 728 aa8.35□□□□□ -1.07
CPSF4-213ENST00000484112 POLR3KQ9Y2Y1 108 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-213ENST00000484112 TRAV38-1A0A0B4J264 116 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 A0A0G2JK05 382 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 A0A1B0GTI1 187 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 A0A1B0GVI7 797 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 POM121CA8CG34 1229 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 ZNF850A8MQ14 1090 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 A8MXK9 166 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 F5H0A9 414 aaPredicted RBP8.34□□□□□ -1.07
CPSF4-213ENST00000484112 TRAPPC2LH3BP13 241 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 SYT7O43581 403 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 RPP14O95059 124 aaKnown RBP8.34□□□□□ -1.07
CPSF4-213ENST00000484112 APOL3O95236 402 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 LHBP01229 141 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 PIPP12273 146 aaPredicted RBP8.34□□□□□ -1.07
CPSF4-213ENST00000484112 MUC1P15941 1255 aaPredicted RBP8.34□□□□□ -1.07
CPSF4-213ENST00000484112 OMGP23515 440 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 NPY4RP50391 375 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 PRSS12P56730 875 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 GNG3P63215 75 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 ZNF154Q13106 437 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 ZMYND11Q15326 602 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 CCDC58Q4VC31 144 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 KLF17Q5JT82 389 aaPredicted RBP8.34□□□□□ -1.07
CPSF4-213ENST00000484112 CLVS2Q5SYC1 327 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 TMEM42Q69YG0 159 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 DCDC5Q6ZRR9 648 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 NLRC3Q7RTR2 1065 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 OR14K1Q8NGZ2 314 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 ZNF420Q8TAQ5 688 aaPredicted RBP8.34□□□□□ -1.07
CPSF4-213ENST00000484112 FBLIM1Q8WUP2 373 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 PIGCQ92535 297 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 TFAP2CQ92754 450 aa8.34□□□□□ -1.07
CPSF4-213ENST00000484112 FAM71F1Q96KD3 344 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms