RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 DCTN6O00399 190 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 DVL1O14640 695 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 IMPA2O14732 288 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 SLC22A2O15244 555 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 OR10H3O60404 316 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 PPP1R3DO95685 299 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 PTBP3O95758 552 aaKnown RBP4.83□□□□□ -1.64
CSDE1-207ENST00000483407 GYPAP02724 150 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 FBP1P09467 338 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 CSF1P09603 554 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 ZNF823P16415 610 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 EEF1B2P24534 225 aaKnown RBP4.83□□□□□ -1.64
CSDE1-207ENST00000483407 SLC6A6P31641 620 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 GRK5P34947 590 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 TGFBR2P37173 567 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 IER3P46695 156 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 OMPP47874 163 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 KRTAP10-3P60369 221 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 LIPEQ05469 1076 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 MICBQ29980 383 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 RSPO1Q2MKA7 263 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-207ENST00000483407 KRTAP27-1Q3LI81 207 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 CDONQ4KMG0 1287 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 FAM90A2PQ658T7 463 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 HIST2H2BDQ6DRA6 164 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 SLC18B1Q6NT16 456 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 CFAP77Q6ZQR2 320 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 BTN2A1Q7KYR7 527 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 SLC36A1Q7Z2H8 476 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 TSEN54Q7Z6J9 526 aaKnown RBP4.83□□□□□ -1.64
CSDE1-207ENST00000483407 LINC00346Q8IVM7 164 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 PDZD9Q8IXQ8 264 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 OR6V1Q8N148 313 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 GALNT4Q8N4A0 578 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 ZSCAN4Q8NAM6 433 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-207ENST00000483407 OR4C15Q8NGM1 316 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 FAM110DQ8TAY7 271 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-207ENST00000483407 FANK1Q8TC84 345 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 NPRL2Q8WTW4 380 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 ST8SIA4Q92187 359 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 RCN3Q96D15 328 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 NMNAT3Q96T66 252 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 HOPXQ9BPY8 73 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-207ENST00000483407 NSRP1Q9H0G5 558 aaKnown RBP4.83□□□□□ -1.64
CSDE1-207ENST00000483407 C16orf95Q9H693 158 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 OPA3Q9H6K4 179 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 RPRD1BQ9NQG5 326 aaKnown RBP4.83□□□□□ -1.64
CSDE1-207ENST00000483407 C1orf123Q9NWV4 160 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 CMTM6Q9NX76 183 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 CYB5R1Q9UHQ9 305 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 KCNG2Q9UJ96 466 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 VPREB3Q9UKI3 123 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 TRBV4-1A0A0J9YWV2 114 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 ANKRD61A6NGH8 418 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 ANKRD30BLA7E2S9 258 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 BHLHE40O14503 412 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 ARPC3O15145 178 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 IDH3BO43837 385 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 GMNNO75496 209 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 TSPAN9O75954 239 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 PAHP00439 452 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 MUC1P15941 1255 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-207ENST00000483407 HIST1H1CP16403 213 aaKnown RBP4.82□□□□□ -1.64
CSDE1-207ENST00000483407 IFNGR2P38484 337 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 DDOSTP39656 456 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 SLC7A2P52569 658 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 SMIM11AP58511 58 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 FXYD6P3P58550 94 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 VAMP2P63027 116 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 HOXA4Q00056 320 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-207ENST00000483407 ZNF92Q03936 586 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 SF3A3Q12874 501 aaKnown RBP eCLIP4.82□□□□□ -1.64
CSDE1-207ENST00000483407 TAF13Q15543 124 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 RFX4Q33E94 735 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 TEX36Q5VZQ5 186 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 METAP1DQ6UB28 335 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-207ENST00000483407 DRAM2Q6UX65 266 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 Q6ZSV7 163 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 Q6ZTK2 550 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 VMO1Q7Z5L0 202 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 NAA40Q86UY6 237 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 GCSAMQ8N6F7 178 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 SDR9C7Q8NEX9 313 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 OR8S1Q8NH09 359 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 OR4K13Q8NH42 304 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 OR52J3Q8NH60 311 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 OR5R1Q8NH85 324 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 RP9Q8TA86 221 aaKnown RBP4.82□□□□□ -1.64
CSDE1-207ENST00000483407 KCTD14Q9BQ13 255 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-207ENST00000483407 COPS4Q9BT78 406 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 IFT27Q9BW83 186 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 OR52D1Q9H346 318 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 RNPEPL1Q9HAU8 725 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 PNRC2Q9NPJ4 139 aaKnown RBP4.82□□□□□ -1.64
CSDE1-207ENST00000483407 ONECUT1Q9UBC0 465 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 KAAG1Q9UBP8 84 aa4.82□□□□□ -1.64
CSDE1-207ENST00000483407 RPUSD1Q9UJJ7 312 aaKnown RBP4.82□□□□□ -1.64
CSDE1-207ENST00000483407 SAMD4AQ9UPU9 718 aaKnown RBP4.82□□□□□ -1.64
CSDE1-207ENST00000483407 IGHV3OR15-7A0A075B7D8 119 aa4.81□□□□□ -1.64
CSDE1-207ENST00000483407 ZNF816-ZNF321PA0A0X1KG74 233 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms