RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 NODALQ96S42 347 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 PDCD1LG2Q9BQ51 273 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 C1orf50Q9BV19 199 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 GGACTQ9BVM4 153 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 OR11A1Q9GZK7 315 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 CHST5Q9GZS9 411 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 OR51J1Q9H342 316 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 REEP1Q9H902 201 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 SPANXB1Q9NS25 103 aaPredicted RBP3.38□□□□□ -1.87
VPS41-212ENST00000482217 RGS18Q9NS28 235 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 PRO0628Q9UI54 55 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 ZNF223Q9UK11 482 aaPredicted RBP3.38□□□□□ -1.87
VPS41-212ENST00000482217 POU2F3Q9UKI9 436 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 RALYQ9UKM9 306 aaKnown RBP3.38□□□□□ -1.87
VPS41-212ENST00000482217 PSG8Q9UQ74 426 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 ZNF256Q9Y2P7 627 aaPredicted RBP3.38□□□□□ -1.87
VPS41-212ENST00000482217 RPL36Q9Y3U8 105 aaKnown RBP3.38□□□□□ -1.87
VPS41-212ENST00000482217 DENND4AQ7Z401 1863 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 NPATQ14207 1427 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 IGKV2D-30A0A075B6S6 120 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 SAA2-SAA4A0A096LPE2 208 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 A0A0G2JMP0 313 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 LOC101059948A0A1B0GTJ6 334 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 EXOC1LA0A1B0GW35 172 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 A0A1W2PPI3 338 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 VPS37CA5D8V6 355 aaPredicted RBP3.37□□□□□ -1.87
VPS41-212ENST00000482217 CCDC160A6NGH7 325 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 NCBP2LA6PVI3 153 aaKnown RBP3.37□□□□□ -1.87
VPS41-212ENST00000482217 TRIM49D1C9J1S8 452 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 M0R1B8 84 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 ZNHIT1O43257 154 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 SOX15O60248 233 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 DUSP11O75319 330 aaKnown RBP3.37□□□□□ -1.87
VPS41-212ENST00000482217 IFNGP01579 166 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 SEMG1P04279 462 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 REG1AP05451 166 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 IGKV5-2P06315 115 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 RBP1P09455 135 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 HOXB7P09629 217 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 SMIM6P0DI80 62 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 HLA-DOBP13765 273 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 RAB25P57735 213 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 RAP1BP61224 184 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 PPP1CBP62140 327 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 SLC7A9P82251 487 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 RELAQ04206 551 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 BCL2L1Q07817 233 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 TWF1Q12792 350 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 TMEM187Q14656 261 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 KIR2DS3Q14952 304 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 TSNQ15631 228 aaKnown RBP3.37□□□□□ -1.87
VPS41-212ENST00000482217 GRK1Q15835 563 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 ZNF726P1Q15940 193 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 C14orf28Q4W4Y0 310 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 HENMT1Q5T8I9 393 aaKnown RBP3.37□□□□□ -1.87
VPS41-212ENST00000482217 ELP2Q6IA86 826 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 SPSB3Q6PJ21 355 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 SPNS3Q6ZMD2 512 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 FAM231DQ6ZW35 169 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 ODF3L1Q8IXM7 274 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 SLC34A3Q8N130 599 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 ZNF567Q8N184 647 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 CADM2Q8N3J6 435 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 SPICQ8N5J4 248 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 ZNF441Q8N8Z8 693 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 OR4M2Q8NGB6 313 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 OR51S1Q8NGJ8 323 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 OR2G2Q8NGZ5 317 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 OR8U1Q8NH10 309 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 PIFOQ8TCI5 191 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 PYROXD1Q8WU10 500 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 TMEM255BQ8WV15 326 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 EEF1AKMT1Q8WVE0 214 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 STMN2Q93045 179 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 PPCDCQ96CD2 204 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 SLC45A3Q96JT2 553 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 PGLYRP3Q96LB9 341 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 RCHY1Q96PM5 261 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 VPS25Q9BRG1 176 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 MRPL45Q9BRJ2 306 aaKnown RBP3.37□□□□□ -1.87
VPS41-212ENST00000482217 TAPBPLQ9BX59 468 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 MS4A8Q9BY19 250 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 Q9HAA7 133 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 NMNAT1Q9HAN9 279 aaPredicted RBP3.37□□□□□ -1.87
VPS41-212ENST00000482217 LRTM1Q9HBL6 345 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 ENY2Q9NPA8 101 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 BIN3Q9NQY0 253 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 SLC7A10Q9NS82 523 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 GALPQ9UBC7 116 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 CES1P1Q9UKY3 287 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 TRAPPC4Q9Y296 219 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 SIGLEC9Q9Y336 463 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 OR51B2Q9Y5P1 312 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 DOCK3Q8IZD9 2030 aa3.37□□□□□ -1.87
VPS41-212ENST00000482217 CD109Q6YHK3 1445 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 RIMS2Q9UQ26 1411 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 C2orf16Q68DN1 1984 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 ZNF816-ZNF321PA0A0X1KG74 233 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 TRABD2BA6NFA1 517 aa3.36□□□□□ -1.87
VPS41-212ENST00000482217 C15orf61A6NNL5 157 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms