RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 GATBO75879 557 aaKnown RBP2.92□□□□□ -1.94
SF3B1-210ENST00000482158 LCA5LO95447 670 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 PTHP01270 115 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 HSPD1P10809 573 aaKnown RBP2.92□□□□□ -1.94
SF3B1-210ENST00000482158 BCAP31P51572 246 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 INCA1Q0VD86 236 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 TRDNQ13061 729 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 IGFBP7Q16270 282 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 DEGS2Q6QHC5 323 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 Q6ZSR6 202 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 APCDD1LQ8NCL9 501 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 OR52K1Q8NGK4 314 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.92□□□□□ -1.94
SF3B1-210ENST00000482158 OR8D1Q8WZ84 308 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 SMARCD1Q96GM5 515 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 GABRG3Q99928 467 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 MARVELD1Q9BSK0 173 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 OR51B5Q9H339 312 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 CHRAC1Q9NRG0 131 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 VAX2Q9UIW0 290 aa2.92□□□□□ -1.94
SF3B1-210ENST00000482158 V9GYY5 206 aaPredicted RBP2.92□□□□□ -1.94
SF3B1-210ENST00000482158 ZNF98A6NK75 572 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 VGLL3A8MV65 326 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 TRDMT1O14717 391 aaKnown RBP2.91□□□□□ -1.94
SF3B1-210ENST00000482158 CCDC22O60826 627 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 PTTG1O95997 202 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 RNASE2P10153 161 aaKnown RBP2.91□□□□□ -1.94
SF3B1-210ENST00000482158 CD28P10747 220 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 NELFEP18615 380 aaKnown RBP2.91□□□□□ -1.94
SF3B1-210ENST00000482158 MSR1P21757 451 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 PSMD4P55036 377 aaKnown RBP2.91□□□□□ -1.94
SF3B1-210ENST00000482158 SP6Q3SY56 376 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 KLHL12Q53G59 568 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 OR2W3Q7Z3T1 314 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 LINC00469Q8N7U9 141 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 TCP10LQ8TDR4 215 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 BCL7BQ9BQE9 202 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 RHOXF2Q9BQY4 288 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 TMEM175Q9BSA9 504 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 STMN4Q9H169 189 aaPredicted RBP2.91□□□□□ -1.94
SF3B1-210ENST00000482158 ARV1Q9H2C2 271 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 FBXO44Q9H4M3 255 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 DYRK4Q9NR20 520 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 CA10Q9NS85 328 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 TMEM100Q9NV29 134 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 TAS2R5Q9NYW4 299 aa2.91□□□□□ -1.94
SF3B1-210ENST00000482158 LOC100653049A0A140TA62 436 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 KRT34O76011 436 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 TPM3P06753 285 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 TPM1P09493 284 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 CCDC172P0C7W6 258 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 IL3RAP26951 378 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 GDI2P50395 445 aaKnown RBP2.9□□□□□ -1.95
SF3B1-210ENST00000482158 TAS2R43P59537 309 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 CTAG1AP78358 180 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 AADACL4Q5VUY2 407 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 MLIPQ5VWP3 458 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 ASCL4Q6XD76 172 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 LINC00523Q86TU6 105 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 SLC25A29Q8N8R3 303 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 OR2Z1Q8NG97 314 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 TFGQ92734 400 aaPredicted RBP2.9□□□□□ -1.95
SF3B1-210ENST00000482158 GPR82Q96P67 336 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 CHRNA10Q9GZZ6 450 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 CSNK1G1Q9HCP0 422 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 UBAP1Q9NZ09 502 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 ADA2Q9NZK5 511 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 DHCR7Q9UBM7 475 aaKnown RBP2.9□□□□□ -1.95
SF3B1-210ENST00000482158 NDRG2Q9UN36 371 aaKnown RBP2.9□□□□□ -1.95
SF3B1-210ENST00000482158 THADAQ6YHU6 1953 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 TMEM131Q92545 1883 aa2.9□□□□□ -1.95
SF3B1-210ENST00000482158 SBNO1A3KN83 1393 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 TNIKQ9UKE5 1360 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 IGKV1-6A0A0C4DH72 117 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 CEACAM18A8MTB9 384 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 SPOPO43791 374 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 IGKV1-39P01597 117 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 IGKV1D-39P04432 117 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 CSKP41240 450 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 HADHBP55084 474 aaKnown RBP2.89□□□□□ -1.95
SF3B1-210ENST00000482158 RBX1P62877 108 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 FAM53BQ14153 422 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 PRSS54Q6PEW0 395 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 C16orf47Q6ZP98 133 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-210ENST00000482158 SLC35D2Q76EJ3 337 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 ZCCHC24Q8N2G6 241 aaKnown RBP2.89□□□□□ -1.95
SF3B1-210ENST00000482158 ZNF321PQ8N8H1 164 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 FBXO36Q8NEA4 188 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 OR5T3Q8NGG3 340 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 TMEM234Q8WY98 164 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 TMEM159Q96B96 161 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 C8orf76Q96K31 380 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 ALS2CR12Q96Q35 445 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 NAPGQ99747 312 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-210ENST00000482158 FANCEQ9HB96 536 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 KLF12Q9Y4X4 402 aa2.89□□□□□ -1.95
SF3B1-210ENST00000482158 SHANK1Q9Y566 2161 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 KIF27Q86VH2 1401 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 IGHV6-1A0A0B4J1U7 121 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 ZNF233A6NK53 670 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms