RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 WBP1Q96G27 269 aa10.1□□□□□ -0.79
GGPS1-205ENST00000482013 NKX3-1Q99801 234 aaPredicted RBP10.1□□□□□ -0.79
GGPS1-205ENST00000482013 SLX1AQ9BQ83 275 aa10.1□□□□□ -0.79
GGPS1-205ENST00000482013 PIGMQ9H3S5 423 aa10.1□□□□□ -0.79
GGPS1-205ENST00000482013 ZNF835Q9Y2P0 537 aa10.1□□□□□ -0.79
GGPS1-205ENST00000482013 NOP16Q9Y3C1 178 aaKnown RBP10.1□□□□□ -0.79
GGPS1-205ENST00000482013 MPC1Q9Y5U8 109 aa10.1□□□□□ -0.79
GGPS1-205ENST00000482013 WDFY3Q8IZQ1 3526 aa10.1□□□□□ -0.79
GGPS1-205ENST00000482013 PRSS44E7EML9 344 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 ZNHIT1O43257 154 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 CRTAPO75718 401 aaPredicted RBP10.09□□□□□ -0.79
GGPS1-205ENST00000482013 NGFP01138 241 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 TMEM225BP0DP42 221 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 PTHLHP12272 177 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 MGMTP16455 207 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 SELEP16581 610 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 PSMB1P20618 241 aaKnown RBP10.09□□□□□ -0.79
GGPS1-205ENST00000482013 CPT2P23786 658 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 GIFP27352 417 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 WNT5AP41221 380 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 CBX5P45973 191 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 RBPJQ06330 500 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 CEACAM21Q3KPI0 293 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 LINC00303Q3SY05 128 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 MOGAT2Q3SYC2 334 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 PLCXD3Q63HM9 321 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 MTFR2Q6P444 385 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 Q6ZTK2 550 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 BHLHA15Q7RTS1 189 aaPredicted RBP10.09□□□□□ -0.79
GGPS1-205ENST00000482013 RNF144BQ7Z419 303 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 AKAP14Q86UN6 197 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 CXorf67Q86X51 503 aaPredicted RBP10.09□□□□□ -0.79
GGPS1-205ENST00000482013 CISD2Q8N5K1 135 aaKnown RBP10.09□□□□□ -0.79
GGPS1-205ENST00000482013 TMEM104Q8NE00 496 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 OR5A2Q8NGI9 324 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 OR56B4Q8NH76 319 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 NPRL2Q8WTW4 380 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 GCDHQ92947 438 aaPredicted RBP10.09□□□□□ -0.79
GGPS1-205ENST00000482013 UPRTQ96BW1 309 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 RAB3CQ96E17 227 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 HIST1H2AAQ96QV6 131 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 USB1Q9BQ65 265 aaKnown RBP10.09□□□□□ -0.79
GGPS1-205ENST00000482013 PTTG3PQ9NZH4 202 aa10.09□□□□□ -0.79
GGPS1-205ENST00000482013 MYEF2Q9P2K5 600 aaKnown RBP10.09□□□□□ -0.79
GGPS1-205ENST00000482013 URB1O60287 2271 aaKnown RBP10.08□□□□□ -0.8
GGPS1-205ENST00000482013 FAM230AA0A1W2PPH8 454 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 PQLC2LA1A4F0 135 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 OR5H1A6NKK0 313 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 ANKRD30BLA7E2S9 258 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 CD300LBA8K4G0 201 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 ZNF850A8MQ14 1090 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 MSTNO14793 375 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 PRAF2O60831 178 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 IGLV1-44P01699 117 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 MT-ND4P03905 459 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 CSTBP04080 98 aaKnown RBP10.08□□□□□ -0.8
GGPS1-205ENST00000482013 CD74P04233 296 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 H2AFB2P0C5Z0 115 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 CCL2P13500 99 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 RAC2P15153 192 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 HIST1H1DP16402 221 aaKnown RBP10.08□□□□□ -0.8
GGPS1-205ENST00000482013 TBPP20226 339 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 OPRM1P35372 400 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 PDZK1IP1Q13113 114 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 PRDX4Q13162 271 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 RSU1Q15404 277 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 TATDN3Q17R31 274 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 SLC22A6Q4U2R8 563 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 C1QL2Q7Z5L3 287 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 TMEM200AQ86VY9 491 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 ZDHHC23Q8IYP9 409 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 CHST4Q8NCG5 386 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 Q8NFD4 153 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 OR51T1Q8NGJ9 327 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 MS4A3Q96HJ5 214 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 SELENOIQ9C0D9 397 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 OPN3Q9H1Y3 402 aaPredicted RBP10.08□□□□□ -0.8
GGPS1-205ENST00000482013 BANF2Q9H503 90 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 ETAA1Q9NY74 926 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 RAXQ9Y2V3 346 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 CUL9Q8IWT3 2517 aa10.08□□□□□ -0.8
GGPS1-205ENST00000482013 INTS1Q8N201 2190 aaKnown RBP10.07□□□□□ -0.8
GGPS1-205ENST00000482013 IGKV1-27A0A075B6S5 117 aa10.07□□□□□ -0.8
GGPS1-205ENST00000482013 A0A0A6YYD4 124 aa10.07□□□□□ -0.8
GGPS1-205ENST00000482013 TMEM235A6NFC5 223 aa10.07□□□□□ -0.8
GGPS1-205ENST00000482013 WIPF3A6NGB9 483 aa10.07□□□□□ -0.8
GGPS1-205ENST00000482013 OR5B21A6NL26 309 aa10.07□□□□□ -0.8
GGPS1-205ENST00000482013 FOXI3A8MTJ6 420 aaPredicted RBP10.07□□□□□ -0.8
GGPS1-205ENST00000482013 SERPINE3A8MV23 424 aa10.07□□□□□ -0.8
GGPS1-205ENST00000482013 H3BUI4 141 aa10.07□□□□□ -0.8
GGPS1-205ENST00000482013 TPD52L2O43399 206 aaKnown RBP10.07□□□□□ -0.8
GGPS1-205ENST00000482013 SMPD2O60906 423 aa10.07□□□□□ -0.8
GGPS1-205ENST00000482013 CYB5AP00167 134 aa10.07□□□□□ -0.8
GGPS1-205ENST00000482013 GLI4P10075 376 aa10.07□□□□□ -0.8
GGPS1-205ENST00000482013 GTF2F2P13984 249 aa10.07□□□□□ -0.8
GGPS1-205ENST00000482013 NAT1P18440 290 aa10.07□□□□□ -0.8
GGPS1-205ENST00000482013 MPZP25189 248 aa10.07□□□□□ -0.8
GGPS1-205ENST00000482013 RAD52P43351 418 aa10.07□□□□□ -0.8
GGPS1-205ENST00000482013 IDH3GP51553 393 aaPredicted RBP10.07□□□□□ -0.8
GGPS1-205ENST00000482013 MECP2P51608 486 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms