RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 FAM189A1O60320 539 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 NXPH4O95158 308 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 IFNA21P01568 189 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 RBMY1DP0C7P1 496 aaKnown RBP6.51□□□□□ -1.37
LSM5-210ENST00000480956 RBMY1A1P0DJD3 496 aaKnown RBP6.51□□□□□ -1.37
LSM5-210ENST00000480956 ALOX5APP20292 161 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 RPL12P30050 165 aaKnown RBP6.51□□□□□ -1.37
LSM5-210ENST00000480956 PYCR1P32322 319 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 GCKP35557 465 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 PROK1P58294 105 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 NUTF2P61970 127 aaKnown RBP6.51□□□□□ -1.37
LSM5-210ENST00000480956 FAM53BQ14153 422 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 IZUMO4Q1ZYL8 232 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 KLF17Q5JT82 389 aaPredicted RBP6.51□□□□□ -1.37
LSM5-210ENST00000480956 TMEM42Q69YG0 159 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 SLC30A8Q8IWU4 369 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 ZFAND1Q8TCF1 268 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 FGF14Q92915 247 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 CNRIP1Q96F85 164 aaPredicted RBP6.51□□□□□ -1.37
LSM5-210ENST00000480956 IMP4Q96G21 291 aaKnown RBP6.51□□□□□ -1.37
LSM5-210ENST00000480956 PECRQ9BY49 303 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 ARV1Q9H2C2 271 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 METTL17Q9H7H0 456 aaPredicted RBP6.51□□□□□ -1.37
LSM5-210ENST00000480956 UGT1A8Q9HAW9 530 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 AMBNQ9NP70 447 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 KLHL21Q9UJP4 597 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 SLC7A11Q9UPY5 501 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 GINS2Q9Y248 185 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 V9GY05 133 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 ARHGAP23Q9P227 1491 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 SETBP1Q9Y6X0 1596 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 ADAMTS13Q76LX8 1427 aa6.51□□□□□ -1.37
LSM5-210ENST00000480956 OTOL1A6NHN0 477 aaPredicted RBP6.5□□□□□ -1.37
LSM5-210ENST00000480956 G3V2L1 256 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 MAGEC1O60732 1142 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 GUSBP08236 651 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 AK4P27144 223 aaPredicted RBP6.5□□□□□ -1.37
LSM5-210ENST00000480956 ACOT2P49753 483 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 APOC4P55056 127 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 TFDP3Q5H9I0 405 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 RAB42Q8N4Z0 105 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 OR10J5Q8NHC4 309 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 C16orf52Q8NHV5 167 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 CEP170P1Q96L14 293 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 ZIM3Q96PE6 472 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 MS4A6AQ9H2W1 248 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 PARVAQ9NVD7 372 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 DDIT4Q9NX09 232 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 CMTM6Q9NX76 183 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 CALYQ9NYX4 217 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 CACNA1FO60840 1977 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 YTHDC2Q9H6S0 1430 aaKnown RBP6.5□□□□□ -1.37
LSM5-210ENST00000480956 TGIF2-C20orf24A0A0A6YYL0 155 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 CENPVL3A0A0U1RRI6 287 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 SOX14O95416 240 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 AIFM1O95831 613 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 DAOP14920 347 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 CRYBA4P53673 196 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 TFAMQ00059 246 aaKnown RBP6.5□□□□□ -1.37
LSM5-210ENST00000480956 IL5RAQ01344 420 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 MXD1Q05195 221 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 CNPY1Q3B7I2 92 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 SYT6Q5T7P8 510 aaPredicted RBP6.5□□□□□ -1.37
LSM5-210ENST00000480956 SH2D5Q6ZV89 423 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 PIM3Q86V86 326 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 ZFP41Q8N8Y5 198 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 TMEM35BQ8NCS4 154 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 GPR32P1Q8NGA4 272 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 OR4F15Q8NGB8 312 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 OR10W1Q8NGF6 305 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 AGAP11Q8TF27 550 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 OR2V2Q96R30 315 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 MEIS3Q99687 375 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 SRXN1Q9BYN0 137 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 ZNF430Q9H8G1 570 aaPredicted RBP6.5□□□□□ -1.37
LSM5-210ENST00000480956 VPS29Q9UBQ0 182 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 ST3GAL6Q9Y274 331 aa6.5□□□□□ -1.37
LSM5-210ENST00000480956 STRCQ7RTU9 1775 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 MYOM1P52179 1685 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 PLEKHG1Q9ULL1 1385 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 TEX48A0A1B0GUV7 120 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 A6NIZ1 184 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 ZNF729A6NN14 1252 aaPredicted RBP6.49□□□□□ -1.37
LSM5-210ENST00000480956 ZNF726A6NNF4 738 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 C15orf61A6NNL5 157 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 KRTAP9-7A8MTY7 169 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 STX10O60499 249 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 IGHG1P01857 330 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 ANOS1P23352 680 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 SERPINB5P36952 375 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 PPICP45877 212 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 ERFP50548 548 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 TEAD2Q15562 447 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 SYCE2Q6PIF2 218 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 ZNF788Q6ZQV5 615 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 LRRTM1Q86UE6 522 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 PHF13Q86YI8 300 aaPredicted RBP6.49□□□□□ -1.37
LSM5-210ENST00000480956 SKA3Q8IX90 412 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 SLC34A3Q8N130 599 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 GAPTQ8N292 157 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms