RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 KDM4DQ6B0I6 523 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 ZNF322Q6U7Q0 402 aaPredicted RBP9.49□□□□□ -0.89
CCM2-213ENST00000480658 MEPCEQ7L2J0 689 aaKnown RBP9.49□□□□□ -0.89
CCM2-213ENST00000480658 ZNF573Q86YE8 665 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 DTX3Q8N9I9 347 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 SCCPDHQ8NBX0 429 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 OR4F5Q8NH21 305 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 C8orf46Q8TAG6 207 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 PIGCQ92535 297 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 RAB3IPQ96QF0 476 aaPredicted RBP9.49□□□□□ -0.89
CCM2-213ENST00000480658 AMELYQ99218 206 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 CADM1Q9BY67 442 aaKnown RBP9.49□□□□□ -0.89
CCM2-213ENST00000480658 PBOV1Q9GZY1 135 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 SLITRK2Q9H156 845 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 PLEKHA1Q9HB21 404 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 CLN6Q9NWW5 311 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 FAM206AQ9NX38 181 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 FAM96BQ9Y3D0 163 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 MMP24Q9Y5R2 645 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 SNX5Q9Y5X3 404 aa9.49□□□□□ -0.89
CCM2-213ENST00000480658 IGHV1-69DA0A0B4J2H0 117 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 ZAR1LA6NP61 321 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 M0R1W7 72 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 DLGAP1O14490 977 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 IGHV1-69P01742 117 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 FBP1P09467 338 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 MMP9P14780 707 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 GLRA1P23415 457 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 ACKR3P25106 362 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 DAPP51397 102 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 CDC42P60953 191 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 CLVS2Q5SYC1 327 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 Q6YL49 198 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 GDPGP1Q6ZNW5 385 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 ZNF826PQ6ZT77 177 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 FAM220AQ7Z4H9 259 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 LDLRAD3Q86YD5 345 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 C11orf53Q8IXP5 236 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 HS3ST5Q8IZT8 346 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 BBS1Q8NFJ9 593 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 OR8J1Q8NGP2 316 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 TRUB1Q8WWH5 349 aaKnown RBP9.48□□□□□ -0.89
CCM2-213ENST00000480658 DYRK2Q92630 601 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 TMIGD2Q96BF3 282 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 C10orf35Q96D05 121 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 MRPL48Q96GC5 212 aaKnown RBP9.48□□□□□ -0.89
CCM2-213ENST00000480658 CENPNQ96H22 339 aaPredicted RBP9.48□□□□□ -0.89
CCM2-213ENST00000480658 RBM4BQ9BQ04 359 aaKnown RBP9.48□□□□□ -0.89
CCM2-213ENST00000480658 METTL8Q9H825 291 aaKnown RBP9.48□□□□□ -0.89
CCM2-213ENST00000480658 BEX1Q9HBH7 125 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 SMURF1Q9HCE7 757 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 NLKQ9UBE8 527 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 SLC25A10Q9UBX3 287 aaPredicted RBP9.48□□□□□ -0.89
CCM2-213ENST00000480658 R4GMQ9 66 aa9.48□□□□□ -0.89
CCM2-213ENST00000480658 C5orf63A6NC05 138 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 OR2AT4A6NND4 320 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 SLC1A7O00341 560 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 SIGLEC5O15389 551 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 HOXA3O43365 443 aaPredicted RBP9.47□□□□□ -0.89
CCM2-213ENST00000480658 PRKYO43930 277 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 GATBO75879 557 aaKnown RBP9.47□□□□□ -0.89
CCM2-213ENST00000480658 SULT1C4O75897 302 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 NRASP01111 189 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 IGLV3-1P01715 115 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 OR2T7P0C7T2 308 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 ATP6V1E1P36543 226 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 GPM6AP51674 278 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 CXCR4P61073 352 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 CSNK2BP67870 215 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 ACTC1P68032 377 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 ACTA1P68133 377 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 ACSM1Q08AH1 577 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 TMEM236Q5W0B7 351 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 PLCXD3Q63HM9 321 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 C12orf73Q69YU5 71 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 ZFP1Q6P2D0 407 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 BRD3OSQ6XYD6 125 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 WDR86Q86TI4 376 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 SLC35F2Q8IXU6 374 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 ZNF561Q8N587 486 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 TCEANCQ8N8B7 351 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 LY6G5BQ8NDX9 201 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 C19orf18Q8NEA5 215 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 OR5D13Q8NGL4 314 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 OR2T27Q8NH04 317 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 ZNF48Q96MX3 618 aaPredicted RBP9.47□□□□□ -0.89
CCM2-213ENST00000480658 CCL13Q99616 98 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 DCTN5Q9BTE1 182 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 GABARAPL3Q9BY60 117 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 SIRPDQ9H106 197 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 ZNF696Q9H7X3 374 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 UNKLQ9H9P5 680 aaKnown RBP9.47□□□□□ -0.89
CCM2-213ENST00000480658 GPR84Q9NQS5 396 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 ZNF319Q9P2F9 582 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 ONECUT1Q9UBC0 465 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 PIGLQ9Y2B2 252 aa9.47□□□□□ -0.89
CCM2-213ENST00000480658 CENPVL3A0A0U1RRI6 287 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 A0A1W2PQ09 198 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 CCDC182A6NF36 153 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 ZNF732B4DXR9 585 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms