RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 MMP9P14780 707 aa18.77■□□□□ 0.6
SDF4-206ENST00000478938 COX15Q7KZN9 410 aa18.77■□□□□ 0.6
SDF4-206ENST00000478938 C11orf42Q8N5U0 333 aa18.77■□□□□ 0.6
SDF4-206ENST00000478938 OR5H2Q8NGV7 314 aa18.77■□□□□ 0.6
SDF4-206ENST00000478938 HAS2Q92819 552 aa18.77■□□□□ 0.6
SDF4-206ENST00000478938 GPX7Q96SL4 187 aaPredicted RBP18.77■□□□□ 0.6
SDF4-206ENST00000478938 TMEM74BQ9NUR3 256 aa18.77■□□□□ 0.6
SDF4-206ENST00000478938 KIAA1456Q9P272 454 aa18.77■□□□□ 0.6
SDF4-206ENST00000478938 C19orf53Q9UNZ5 99 aaPredicted RBP18.77■□□□□ 0.6
SDF4-206ENST00000478938 YIPF1Q9Y548 306 aa18.77■□□□□ 0.6
SDF4-206ENST00000478938 THSD7BQ9C0I4 1608 aa18.77■□□□□ 0.6
SDF4-206ENST00000478938 FAM221AA4D161 298 aa18.77■□□□□ 0.59
SDF4-206ENST00000478938 CD55P08174 381 aa18.77■□□□□ 0.59
SDF4-206ENST00000478938 JMJD7P0C870 316 aa18.77■□□□□ 0.59
SDF4-206ENST00000478938 TNFSF10P50591 281 aa18.77■□□□□ 0.59
SDF4-206ENST00000478938 ALG10Q5BKT4 473 aa18.77■□□□□ 0.59
SDF4-206ENST00000478938 COA6Q5JTJ3 125 aaKnown RBP18.77■□□□□ 0.59
SDF4-206ENST00000478938 C1orf123Q9NWV4 160 aa18.77■□□□□ 0.59
SDF4-206ENST00000478938 FKBP11Q9NYL4 201 aa18.77■□□□□ 0.59
SDF4-206ENST00000478938 SLC5A6Q9Y289 635 aa18.77■□□□□ 0.59
SDF4-206ENST00000478938 MEGF11A6BM72 1044 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 FHL5Q5TD97 284 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 LYPD6Q86Y78 171 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 OR2AJ1Q8NGZ0 328 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 TSLPQ969D9 159 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.76■□□□□ 0.59
SDF4-206ENST00000478938 AK3Q9UIJ7 227 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 FIGNL2A6NMB9 653 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 E5RGE8 158 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 ITGB1BP1O14713 200 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 HPRT1P00492 218 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 LCATP04180 440 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 WNT5AP41221 380 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 SOX8P57073 446 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 AMZ2Q86W34 360 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 OR2G3Q8NGZ4 309 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 TMEM18Q96B42 140 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 NSG2Q9Y328 171 aa18.76■□□□□ 0.59
SDF4-206ENST00000478938 A0A1B0GU03 582 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 TCRBV21S2A2A0A5A6 115 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 GPR137BO60478 399 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 HSPB1P04792 205 aaKnown RBP18.75■□□□□ 0.59
SDF4-206ENST00000478938 TMEM11P17152 192 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 CEACAM8P31997 349 aaPredicted RBP18.75■□□□□ 0.59
SDF4-206ENST00000478938 QRFPP83859 136 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 PARS2Q7L3T8 475 aaKnown RBP18.75■□□□□ 0.59
SDF4-206ENST00000478938 ADIPOR2Q86V24 386 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 TSPAN32Q96QS1 320 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 GRHPRQ9UBQ7 328 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 OSGIN2Q9Y236 505 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 LOC107986453A0A1B0GWG9 222 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 RAD51DO75771 328 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 HNF1AP20823 631 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 TUBG1P23258 451 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 PLPP4Q5VZY2 271 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 DEGS2Q6QHC5 323 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 ZNF66Q6ZN08 573 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 SPRED2Q7Z698 418 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 LHFPL1Q86WI0 220 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 CDRT4Q8N9R6 151 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 OR52N4Q8NGI2 321 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 SCGB3A2Q96PL1 93 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 OR2J1Q9GZK6 312 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 FOXJ2Q9P0K8 574 aa18.75■□□□□ 0.59
SDF4-206ENST00000478938 SCN10AQ9Y5Y9 1956 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 B4DEV8 164 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 GPR3P46089 330 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 VAMP2P63027 116 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 KCNMB1Q16558 191 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 PLAC9Q5JTB6 97 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 ZNF506Q5JVG8 444 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 CATSPERDQ86XM0 798 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 LRRC75AQ8NAA5 344 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 FGGYQ96C11 551 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 B3GALT5Q9Y2C3 310 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 A0A0A6YYD4 124 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 B4E171 279 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 PLRG1O43660 514 aaKnown RBP18.74■□□□□ 0.59
SDF4-206ENST00000478938 CYB5R3P00387 301 aaPredicted RBP18.74■□□□□ 0.59
SDF4-206ENST00000478938 ZNF888P0CJ79 500 aaPredicted RBP18.74■□□□□ 0.59
SDF4-206ENST00000478938 CPMP14384 443 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 FOLR1P15328 257 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 AMY2BP19961 511 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 NOVA1P51513 510 aaKnown RBP18.74■□□□□ 0.59
SDF4-206ENST00000478938 EMP2P54851 167 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 GABREP78334 506 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 SSX7Q7RTT5 188 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 EXTL1Q92935 676 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 NUS1Q96E22 293 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 SRD5A3Q9H8P0 318 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 SERINC1Q9NRX5 453 aa18.74■□□□□ 0.59
SDF4-206ENST00000478938 IGKV1D-42A0A075B6H8 117 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 LOC101059948A0A1B0GTJ6 334 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 LNP1A1A4G5 178 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 HSPB2A8KAH6 182 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 ETV2O00321 342 aaPredicted RBP18.73■□□□□ 0.59
SDF4-206ENST00000478938 CTHP32929 405 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 GRK6P43250 576 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 ZP2Q05996 745 aa18.73■□□□□ 0.59
SDF4-206ENST00000478938 HSPB2Q16082 182 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms