RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 SFRP4Q6FHJ7 346 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-215ENST00000478531 TMPRSS11AQ6ZMR5 421 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 MOB3CQ70IA8 216 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 SYS1Q8N2H4 156 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 KLHL36Q8N4N3 616 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 DEFB108BQ8NET1 73 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 OR1M1Q8NGA1 313 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 TRMT10AQ8TBZ6 339 aaKnown RBP5.8□□□□□ -1.48
BRCA1-215ENST00000478531 Q8TCH9 128 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 FBLIM1Q8WUP2 373 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 OR5P3Q8WZ94 311 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 RPL3LQ92901 407 aaKnown RBP5.8□□□□□ -1.48
BRCA1-215ENST00000478531 RAB39BQ96DA2 213 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 RNF170Q96K19 258 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 ZNF649Q9BS31 505 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 FGF23Q9GZV9 251 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-215ENST00000478531 METTL17Q9H7H0 456 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-215ENST00000478531 ABCB9Q9NP78 766 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 CHCHD3Q9NX63 227 aaKnown RBP5.8□□□□□ -1.48
BRCA1-215ENST00000478531 RNF7Q9UBF6 113 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 CLEC2DQ9UHP7 191 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 EXOSC1Q9Y3B2 195 aaKnown RBP5.8□□□□□ -1.48
BRCA1-215ENST00000478531 V9GYS6 101 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 ATRQ13535 2644 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 TRBV2A0A0J9YWF9 115 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 PNMA8CA0A1B0GUJ8 204 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 PRSS47A8MTI9 375 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 ZNF732B4DXR9 585 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 FAM157AC9JC47 383 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 PTGES3LE9PB15 166 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 SLC1A7O00341 560 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 CDIPTO14735 213 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 MYL12BO14950 172 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 IGHV2-5P01817 119 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 ZNF20P17024 532 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 CCL1P22362 96 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 MYF6P23409 242 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 LMO4P61968 165 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 ALKBH1Q13686 389 aaKnown RBP5.79□□□□□ -1.48
BRCA1-215ENST00000478531 ZNF181Q2M3W8 571 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 CEACAM21Q3KPI0 293 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 CLVS2Q5SYC1 327 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 ZBTB37Q5TC79 503 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 TMEM244Q5VVB8 128 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 XAF1Q6GPH4 301 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 FAM166AQ6J272 317 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 MUC20Q8N307 709 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-215ENST00000478531 SPICQ8N5J4 248 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 PLPP7Q8NBV4 271 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 OR51A4Q8NGJ6 313 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 OR13C3Q8NGS6 347 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 OR14K1Q8NGZ2 314 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 OR10AC1Q8NH08 325 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 OR5AK2Q8NH90 309 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 LRRC29Q8WV35 223 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 GATAD2BQ8WXI9 593 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 ERGIC1Q969X5 290 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 PDCD1LG2Q9BQ51 273 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 JAM3Q9BX67 310 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 ANKRD60Q9BZ19 345 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 COMMD4Q9H0A8 199 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 CNOT2Q9NZN8 540 aaKnown RBP5.79□□□□□ -1.48
BRCA1-215ENST00000478531 PSORS1C1Q9UIG5 152 aa5.79□□□□□ -1.48
BRCA1-215ENST00000478531 PPIAL4EA0A075B759 164 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 IGHV3OR15-7A0A075B7D8 119 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 ANKRD61A6NGH8 418 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 TMEM210A6NLX4 147 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 OR4C45A6NMZ5 311 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 DHRS7CA6NNS2 312 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 CEACAM18A8MTB9 384 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 A8MV72 311 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-215ENST00000478531 PPIAL4DF5H284 164 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 PTBP3O95758 552 aaKnown RBP5.78□□□□□ -1.48
BRCA1-215ENST00000478531 PPIAL4FP0DN26 164 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 PIPP12273 146 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-215ENST00000478531 RPS2P15880 293 aaKnown RBP5.78□□□□□ -1.48
BRCA1-215ENST00000478531 EGR1P18146 543 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 C21orf33P30042 268 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-215ENST00000478531 CCR9P51686 369 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 SEC61A1P61619 476 aaKnown RBP5.78□□□□□ -1.48
BRCA1-215ENST00000478531 GNG3P63215 75 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 LCN2P80188 198 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 C6orf141Q5SZD1 244 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 FDX2Q6P4F2 183 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 WDR82Q6UXN9 313 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 LRRC28Q86X40 367 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-215ENST00000478531 ZFP41Q8N8Y5 198 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 LINC01356Q8N9X3 169 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 SCCPDHQ8NBX0 429 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 TSEN15Q8WW01 171 aaKnown RBP5.78□□□□□ -1.48
BRCA1-215ENST00000478531 SCN3BQ9NY72 215 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 ERVK-18Q9QC07 812 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 ZNF69Q9UC07 566 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 KCNS2Q9ULS6 477 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 HHLA2Q9UM44 414 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 CAB39Q9Y376 341 aaPredicted RBP5.78□□□□□ -1.48
BRCA1-215ENST00000478531 PPIAL4AQ9Y536 164 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 FAM230AA0A1W2PPH8 454 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 OOEPA6NGQ2 149 aa5.78□□□□□ -1.48
BRCA1-215ENST00000478531 OR5B21A6NL26 309 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms