RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 FAM78AQ5JUQ0 283 aa11.9□□□□□ -0.51
DFFB-209ENST00000477548 RD3Q7Z3Z2 195 aa11.9□□□□□ -0.51
DFFB-209ENST00000477548 LINC00346Q8IVM7 164 aa11.9□□□□□ -0.51
DFFB-209ENST00000477548 HSD17B11Q8NBQ5 300 aa11.9□□□□□ -0.51
DFFB-209ENST00000477548 OR10J5Q8NHC4 309 aa11.9□□□□□ -0.51
DFFB-209ENST00000477548 RAB39BQ96DA2 213 aa11.9□□□□□ -0.51
DFFB-209ENST00000477548 S1PR5Q9H228 398 aa11.9□□□□□ -0.51
DFFB-209ENST00000477548 SH3BGRL3Q9H299 93 aa11.9□□□□□ -0.51
DFFB-209ENST00000477548 PLEKHA2Q9HB19 425 aa11.9□□□□□ -0.51
DFFB-209ENST00000477548 STRAPQ9Y3F4 350 aaKnown RBP11.9□□□□□ -0.51
DFFB-209ENST00000477548 TGIF2-C20orf24A0A0A6YYL0 155 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 PTBP3O95758 552 aaKnown RBP11.89□□□□□ -0.51
DFFB-209ENST00000477548 GSTP1P09211 210 aaKnown RBP11.89□□□□□ -0.51
DFFB-209ENST00000477548 HIST1H1DP16402 221 aaKnown RBP11.89□□□□□ -0.51
DFFB-209ENST00000477548 CXCR1P25024 350 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 WASP42768 502 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 RAB38P57729 211 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 RAB4BP61018 213 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 CSNK2A1P68400 391 aaPredicted RBP11.89□□□□□ -0.51
DFFB-209ENST00000477548 PLAC9Q5JTB6 97 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 DNLZQ5SXM8 178 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 AKR1C8PQ5T2L2 129 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 AGBL4Q5VU57 503 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 AADACL3Q5VUY0 350 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 CHRDL2Q6WN34 429 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 DCXRQ7Z4W1 244 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 FAM160A2Q8N612 972 aaPredicted RBP11.89□□□□□ -0.51
DFFB-209ENST00000477548 CSNK2A3Q8NEV1 391 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 ZNF524Q96C55 264 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 LPAR5Q9H1C0 372 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 BANF2Q9H503 90 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 WASF3Q9UPY6 502 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 SLC5A6Q9Y289 635 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 COA3Q9Y2R0 106 aaPredicted RBP11.89□□□□□ -0.51
DFFB-209ENST00000477548 PRR19A6NJB7 356 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 ADAM10O14672 748 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 SRSF10O75494 262 aaKnown RBP11.89□□□□□ -0.51
DFFB-209ENST00000477548 ZNF823P16415 610 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 ZNF93P35789 620 aaPredicted RBP11.89□□□□□ -0.51
DFFB-209ENST00000477548 GPR3P46089 330 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 AFF3P51826 1226 aaKnown RBP11.89□□□□□ -0.51
DFFB-209ENST00000477548 LBX1P52954 281 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 GLO1Q04760 184 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 GAB4Q2WGN9 574 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 C9orf50Q5SZB4 431 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 LFNGQ8NES3 379 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 OR10AD1Q8NGE0 317 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 C16orf52Q8NHV5 167 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 FLVCR1-AS1Q8TAF5 88 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 ADAT3Q96EY9 351 aaPredicted RBP11.89□□□□□ -0.51
DFFB-209ENST00000477548 CYYR1Q96J86 154 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 SERGEFQ9UGK8 458 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 BRWD1Q9NSI6 2320 aa11.89□□□□□ -0.51
DFFB-209ENST00000477548 A0A0A6YYD4 124 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 TMEM14DPA8MWL7 114 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 MASP2O00187 686 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 SCDO00767 359 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 CRTAPO75718 401 aaPredicted RBP11.88□□□□□ -0.51
DFFB-209ENST00000477548 QDPRP09417 244 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 ATXN8OSP0DMR3 200 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 GABRA4P48169 554 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 GLIPR1L1Q6UWM5 242 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 TMEM182Q6ZP80 229 aaPredicted RBP11.88□□□□□ -0.51
DFFB-209ENST00000477548 TMEM156Q8N614 296 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 OR9A4Q8NGU2 314 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 EMG1Q92979 244 aaKnown RBP11.88□□□□□ -0.51
DFFB-209ENST00000477548 ZNF845Q96IR2 970 aaPredicted RBP11.88□□□□□ -0.51
DFFB-209ENST00000477548 PACRGQ96M98 296 aaPredicted RBP11.88□□□□□ -0.51
DFFB-209ENST00000477548 KLHDC3Q9BQ90 382 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 HS3ST3B1Q9Y662 390 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 A0A1W2PP55 124 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 SMCO3A2RU48 225 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 RPL36A-HNRNPH2H7BZ11 118 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 PHOX2AO14813 284 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 TNFSF14O43557 240 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 SYT7O43581 403 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 RAD51DO75771 328 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 NSA2O95478 260 aaKnown RBP11.88□□□□□ -0.51
DFFB-209ENST00000477548 PTGER4P35408 488 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 P2RY1P47900 373 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 ERVFRD-1P60508 538 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 C1orf140Q5VVS0 124 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 ZNF385CQ66K41 422 aaPredicted RBP11.88□□□□□ -0.51
DFFB-209ENST00000477548 TCEAL6Q6IPX3 200 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 LHFPL1Q86WI0 220 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 GPBAR1Q8TDU6 330 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 CCDC3Q9BQI4 270 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 NUDT16L1Q9BRJ7 211 aaKnown RBP11.88□□□□□ -0.51
DFFB-209ENST00000477548 ARV1Q9H2C2 271 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 UNKLQ9H9P5 680 aaKnown RBP11.88□□□□□ -0.51
DFFB-209ENST00000477548 WFDC1Q9HC57 220 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 FGF22Q9HCT0 170 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 OSGIN2Q9Y236 505 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 TP53TG5Q9Y2B4 290 aa11.88□□□□□ -0.51
DFFB-209ENST00000477548 MARCH11A6NNE9 402 aa11.87□□□□□ -0.51
DFFB-209ENST00000477548 A8MVM7 634 aa11.87□□□□□ -0.51
DFFB-209ENST00000477548 H2BFMP0C1H6 154 aa11.87□□□□□ -0.51
DFFB-209ENST00000477548 SUCLG1P53597 346 aaKnown RBP11.87□□□□□ -0.51
DFFB-209ENST00000477548 OR8G1Q15617 311 aa11.87□□□□□ -0.51
DFFB-209ENST00000477548 GGNBP1Q5YKI7 109 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms