RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 TIAF1O95411 115 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 FAM157BP0CG42 384 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 GABRA1P14867 456 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 GDF1P27539 372 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 CAPZBP47756 277 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 POLR2HP52434 150 aaKnown RBP4.42□□□□□ -1.7
CCDC39-204ENST00000476379 FGF8P55075 233 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-204ENST00000476379 RPS11P62280 158 aaKnown RBP eCLIP4.42□□□□□ -1.7
CCDC39-204ENST00000476379 KIAA0141Q14154 515 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-204ENST00000476379 MEF2DQ14814 521 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 IGSF11Q5DX21 431 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 ANKRD16Q6P6B7 361 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 DRAM2Q6UX65 266 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 GLRX5Q86SX6 157 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 SGPP2Q8IWX5 399 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 C9orf40Q8IXQ3 194 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 OR11L1Q8NGX0 322 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 IFI44Q8TCB0 444 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 SFT2D1Q8WV19 159 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 MARC2Q969Z3 335 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 SEH1LQ96EE3 360 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 TCTN2Q96GX1 697 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 PRRT1Q99946 306 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 ARPC5LQ9BPX5 153 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 PRO1933Q9H354 126 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 TAF9BQ9HBM6 251 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 PARD6AQ9NPB6 346 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 PLA2G3Q9NZ20 509 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 OR5AC2Q9NZP5 309 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 IGKV1D-42A0A075B6H8 117 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 A0A1W2PPC1 479 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 ANKRD20A5PA0PJZ0 165 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 OR5K4A6NMS3 321 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 SSSCA1O60232 199 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 RAD51DO75771 328 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 IGHG1P01857 330 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 FBP1P09467 338 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 TRAPPC2P0DI81 140 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 TRAPPC2BP0DI82 140 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 MGMTP16455 207 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 AGTR1P30556 359 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 NPBWR1P48145 328 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 HSD11B2P80365 405 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 SERTAD2Q14140 314 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 ELFN2Q5R3F8 820 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 PRR31Q5SQ13 230 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 TMEM244Q5VVB8 128 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF626Q68DY1 528 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF660Q6AZW8 331 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF813Q6ZN06 617 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 PPP1R3BQ86XI6 285 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 ASB5Q8WWX0 329 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 FRZBQ92765 325 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 DDIT4LQ96D03 193 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 BSCL2Q96G97 398 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF488Q96MN9 340 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 KCNJ16Q9NPI9 418 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 TREM2Q9NZC2 230 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF629Q9UEG4 869 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-204ENST00000476379 KCNK7Q9Y2U2 307 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 NAP1L6A6NFF2 107 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 CXCL13O43927 109 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 WDR1O75083 606 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 PSMB6P28072 239 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 FCGR2CP31995 323 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 GLP1RP43220 463 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 STARD6P59095 220 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 RNF4P78317 190 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 CLLU1Q5K131 121 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 FAM122CQ6P4D5 195 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 H1FNTQ75WM6 255 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF695Q8IW36 515 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 HIST1H2AAQ96QV6 131 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 LYRM4Q9HD34 91 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 P4HTMQ9NXG6 502 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 KCNIP3Q9Y2W7 256 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 USP9YO00507 2555 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-204ENST00000476379 MN1Q10571 1320 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-204ENST00000476379 LRRK1Q38SD2 2015 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 CFAP46Q8IYW2 2715 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 A0A1W2PPE2 198 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 SLC17A2O00624 439 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 SPP1P10451 314 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 S100PP25815 95 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 CASRP41180 1078 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 LIMK1P53667 647 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 PIGPP57054 158 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 ACSM1Q08AH1 577 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 PIGYQ3MUY2 71 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 C11orf87Q6NUJ2 197 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 CD300LDQ6UXZ3 194 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 SLC25A26Q70HW3 274 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 C1QL2Q7Z5L3 287 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 GCNT2Q8N0V5 402 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 SYS1Q8N2H4 156 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 IL22RA1Q8N6P7 574 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 OR1K1Q8NGR3 316 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 RXFP4Q8TDU9 374 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 DMRTA2Q96SC8 542 aa4.42□□□□□ -1.7
CCDC39-204ENST00000476379 KCNJ15Q99712 375 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms