RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 GDF2Q9UK05 429 aaPredicted RBP10.4□□□□□ -0.74
U2AF1-209ENST00000475639 CSAG2Q9Y5P2 127 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 THSD7AQ9UPZ6 1657 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 A0A1B0GWA3 101 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 KLRC4-KLRK1H3BQV0 150 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 FOLR2P14207 255 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 GPR12P47775 334 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 FOXK2Q01167 660 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 TOMM20LQ6UXN7 152 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 PLPP7Q8NBV4 271 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 BCL2L2Q92843 193 aaPredicted RBP10.4□□□□□ -0.74
U2AF1-209ENST00000475639 PINX1Q96BK5 328 aaKnown RBP10.4□□□□□ -0.74
U2AF1-209ENST00000475639 TOLLIPQ9H0E2 274 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 FAM24AA6NFZ4 105 aa10.4□□□□□ -0.75
U2AF1-209ENST00000475639 CCSO14618 274 aa10.4□□□□□ -0.75
U2AF1-209ENST00000475639 OR5AL1P0C617 328 aa10.4□□□□□ -0.75
U2AF1-209ENST00000475639 ABCD3P28288 659 aa10.4□□□□□ -0.75
U2AF1-209ENST00000475639 RPL12P30050 165 aaKnown RBP10.4□□□□□ -0.75
U2AF1-209ENST00000475639 NR0B2Q15466 257 aa10.4□□□□□ -0.75
U2AF1-209ENST00000475639 BTNL3Q6UXE8 466 aa10.4□□□□□ -0.75
U2AF1-209ENST00000475639 WDR61Q9GZS3 305 aaKnown RBP10.4□□□□□ -0.75
U2AF1-209ENST00000475639 CHST11Q9NPF2 352 aa10.4□□□□□ -0.75
U2AF1-209ENST00000475639 LANCL2Q9NS86 450 aa10.4□□□□□ -0.75
U2AF1-209ENST00000475639 DMRT1Q9Y5R6 373 aa10.4□□□□□ -0.75
U2AF1-209ENST00000475639 NLRC5Q86WI3 1866 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 TMEM272A0A1B0GTI8 110 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 PYCARD-AS1I3L0S3 204 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 CD38P28907 300 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 PFN3P60673 137 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 DOK3Q7L591 496 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 KLHDC9Q8NEP7 349 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 DTD2Q96FN9 168 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 PARD6AQ9NPB6 346 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 H0YGG7 62 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 J3QRE1 110 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 VAMP5O95183 116 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 EPXP11678 715 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 FKBP2P26885 142 aaKnown RBP10.39□□□□□ -0.75
U2AF1-209ENST00000475639 ZP2Q05996 745 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 SLC35D3Q5M8T2 416 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 WDR88Q6ZMY6 472 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 TIPARPQ7Z3E1 657 aaKnown RBP10.39□□□□□ -0.75
U2AF1-209ENST00000475639 COMMD1Q8N668 190 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 SLC38A9Q8NBW4 561 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 BHLHE23Q8NDY6 225 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 C17orf47Q8NEP4 570 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 OR2AK2Q8NG84 335 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 PECRQ9BY49 303 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 TRAV14DV4A0A0A6YYC5 116 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 NDUFB6O95139 128 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 PSMB2P49721 201 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 RAB38P57729 211 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 CMTM4Q8IZR5 234 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 OR10X1Q8NGY0 326 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 SLC39A7Q92504 469 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 BET1LQ9NYM9 111 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 DCTDP32321 178 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 BMI1P35226 326 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 PRSS16Q9NQE7 514 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 SLC45A1Q9Y2W3 748 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 TIMM9Q9Y5J7 89 aa10.39□□□□□ -0.75
U2AF1-209ENST00000475639 SCRG1O75711 98 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 SLC2A10O95528 541 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 PTHLHP12272 177 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 TEAD1P28347 426 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 CSNK1DP48730 415 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 PNLIPRP2P54317 469 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 RPS16P62249 146 aaKnown RBP10.38□□□□□ -0.75
U2AF1-209ENST00000475639 JMJD6Q6NYC1 403 aaPredicted RBP10.38□□□□□ -0.75
U2AF1-209ENST00000475639 SLC36A1Q7Z2H8 476 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 TCEAL8Q8IYN2 117 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 MAML2Q8IZL2 1156 aaPredicted RBP10.38□□□□□ -0.75
U2AF1-209ENST00000475639 ARHGEF39Q8N4T4 335 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 OR2M3Q8NG83 312 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 OR5AP2Q8NGF4 316 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 ZFPM2Q8WW38 1151 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 DYRK2Q92630 601 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 METTL1Q9UBP6 276 aaKnown RBP10.38□□□□□ -0.75
U2AF1-209ENST00000475639 SVILO95425 2214 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.38□□□□□ -0.75
U2AF1-209ENST00000475639 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.38□□□□□ -0.75
U2AF1-209ENST00000475639 NTN1O95631 604 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 AIFM1O95831 613 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 FURINP09958 794 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 AREGP15514 252 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 PMCHP20382 165 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 ADPRHP54922 357 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 CLDN2P57739 230 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 PMP22Q01453 160 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 THEM4Q5T1C6 240 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 DCAF12Q5T6F0 453 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 ZNF66Q6ZN08 573 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 MOB3AQ96BX8 217 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.38□□□□□ -0.75
U2AF1-209ENST00000475639 DOK2O60496 412 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 MT-ATP6P00846 226 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 CCR7P32248 378 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 ERVFC1-1P60608 527 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 PPP1CBP62140 327 aa10.38□□□□□ -0.75
U2AF1-209ENST00000475639 ZNF573Q86YE8 665 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms