RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 C5orf49A4QMS7 147 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 DHRS7CA6NNS2 312 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 ERCC1P07992 297 aaPredicted RBP13.31□□□□□ -0.28
CPSF3-203ENST00000475482 DBHP09172 617 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 CCL2P13500 99 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 ZNF250P15622 560 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 FSTP19883 344 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 APEX1P27695 318 aaKnown RBP13.31□□□□□ -0.28
CPSF3-203ENST00000475482 PPP3R1P63098 170 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 MALLQ13021 153 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 DYNC1I2Q13409 638 aaKnown RBP13.31□□□□□ -0.28
CPSF3-203ENST00000475482 FAM27D1Q5T7N8 215 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 CYB5R2Q6BCY4 276 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 PGAP1Q75T13 922 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 OR51A4Q8NGJ6 313 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 OR5L1Q8NGL2 311 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 OR5D14Q8NGL3 314 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 SLC7A6Q92536 515 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 PPP1R14AQ96A00 147 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 APOBEC3DQ96AK3 386 aaPredicted RBP13.31□□□□□ -0.28
CPSF3-203ENST00000475482 SYT3Q9BQG1 590 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 MRI1Q9BV20 369 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 C1QTNF5Q9BXJ0 243 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 NXF2Q9GZY0 626 aaKnown RBP13.31□□□□□ -0.28
CPSF3-203ENST00000475482 OPA3Q9H6K4 179 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 DYNLRB1Q9NP97 96 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 GPR84Q9NQS5 396 aa13.31□□□□□ -0.28
CPSF3-203ENST00000475482 ZNF275Q9NSD4 429 aaPredicted RBP13.31□□□□□ -0.28
CPSF3-203ENST00000475482 MYEF2Q9P2K5 600 aaKnown RBP13.31□□□□□ -0.28
CPSF3-203ENST00000475482 EIF3KQ9UBQ5 218 aaKnown RBP13.31□□□□□ -0.28
CPSF3-203ENST00000475482 FBN1P35555 2871 aaKnown RBP13.3□□□□□ -0.28
CPSF3-203ENST00000475482 A0A1B0GTI1 187 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 A0A1W2PPK0 400 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 ANKRD61A6NGH8 418 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 ANXA2P2A6NMY6 339 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 NOTOA8MTQ0 251 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 ICMTO60725 284 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 LILRA1O75019 489 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 DHRS3O75911 302 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 GZMKP49863 264 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 UCP2P55851 309 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 PARP16Q8N5Y8 322 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 PLPP7Q8NBV4 271 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 OR10AC1Q8NH08 325 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 UBASH3BQ8TF42 649 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 S100ZQ8WXG8 99 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 POM121L2Q96KW2 1035 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 BCL2L14Q9BZR8 327 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 C6orf62Q9GZU0 229 aaPredicted RBP13.3□□□□□ -0.28
CPSF3-203ENST00000475482 PPIL3Q9H2H8 161 aaKnown RBP13.3□□□□□ -0.28
CPSF3-203ENST00000475482 CDH20Q9HBT6 801 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 NEK6Q9HC98 313 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 MXRA5Q9NR99 2828 aa13.3□□□□□ -0.28
CPSF3-203ENST00000475482 PIN1P1O15428 100 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 IGLV3-1P01715 115 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 CLEC2LP0C7M8 214 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 FAM157BP0CG42 384 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 CCNOP22674 350 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 GNALP38405 381 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 RAD52P43351 418 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 ALDH3B1P43353 468 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 MOGQ16653 247 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 GFOD2Q3B7J2 385 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 RGS7BPQ6MZT1 257 aaPredicted RBP13.29□□□□□ -0.28
CPSF3-203ENST00000475482 COLCA1Q6ZS62 124 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 NAA40Q86UY6 237 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 NKAIN3Q8N8D7 197 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 TBC1D15Q8TC07 691 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 PP6455Q8WZ26 134 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 MSI2Q96DH6 328 aaKnown RBP13.29□□□□□ -0.28
CPSF3-203ENST00000475482 FAM71F1Q96KD3 344 aaPredicted RBP13.29□□□□□ -0.28
CPSF3-203ENST00000475482 CEP19Q96LK0 163 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 FZR1Q9UM11 496 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 V9GY05 133 aa13.29□□□□□ -0.28
CPSF3-203ENST00000475482 LOC100509620A0A075B734 347 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 SHISA3A0PJX4 238 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 MAP2K3P46734 347 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 ERVS71-1P61550 626 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 MRPS11P82912 194 aaKnown RBP13.28□□□□□ -0.28
CPSF3-203ENST00000475482 CARTPTQ16568 116 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 CHRFAM7AQ494W8 412 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 DDI2Q5TDH0 399 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 GLT8D1Q68CQ7 371 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 SFXN4Q6P4A7 337 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 Q6ZSR3 168 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 C1orf174Q8IYL3 243 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 OR6Q1Q8NGQ2 317 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 HPS1Q92902 700 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 FGGYQ96C11 551 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 FOXRED1Q96CU9 486 aaPredicted RBP13.28□□□□□ -0.28
CPSF3-203ENST00000475482 C1orf159Q96HA4 380 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 REEP6Q96HR9 211 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 MDFIQ99750 246 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 BARHL1Q9BZE3 327 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 ZCCHC4Q9H5U6 513 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 SMURF1Q9HCE7 757 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 HMG20AQ9NP66 347 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 TBCCD1Q9NVR7 557 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 ABRACLQ9P1F3 81 aa13.28□□□□□ -0.28
CPSF3-203ENST00000475482 ZNF319Q9P2F9 582 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms