RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 PSMD7P51665 324 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CRISP1P54107 249 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TMBIM6P55061 237 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CAV3P56539 151 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CTBP2P56545 445 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 WNT4P56705 351 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 C21orf59P57076 290 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SNRPGP62308 76 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 LSM3P62310 102 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ESRRGP62508 458 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RPS4XP62701 263 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RPS25P62851 125 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SRPXP78539 464 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CDK5Q00535 292 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 IFITM3Q01628 133 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF85Q03923 595 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 PRKCDQ05655 676 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TGM3Q08188 693 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 FUT7Q11130 342 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ST3GAL4Q11206 333 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TSPAN31Q12999 210 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SKP2Q13309 424 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ILKQ13418 452 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CRMP1Q14194 572 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 GINS1Q14691 196 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 OPCMLQ14982 345 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TRAM2Q15035 370 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 OR1Q1Q15612 314 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TOMM34Q15785 309 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF141Q15928 474 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 NDUFA9Q16795 377 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF791Q3KP31 576 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 MESTQ5EB52 335 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 VWA2Q5GFL6 755 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CLEC12AQ5QGZ9 265 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 OR2G6Q5TZ20 316 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 AADACL4Q5VUY2 407 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 OTPQ5XKR4 325 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ASPHD2Q6ICH7 369 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SLC27A4Q6P1M0 643 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 C1orf94Q6P1W5 598 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 NIPAL3Q6P499 406 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CBLN3Q6UW01 205 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 B3GLCTQ6Y288 498 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 HSDL2Q6YN16 418 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SHISA6Q6ZSJ9 500 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RASSF6Q6ZTQ3 369 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SSX6Q7RTT6 188 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 PRSS48Q7RTY5 328 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 FAM122BQ7Z309 247 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 C16orf62Q7Z3J2 963 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 C5orf24Q7Z6I8 188 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 NRARPQ7Z6K4 114 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 GKN2Q86XP6 184 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 GRAMD2AQ8IUY3 354 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ERI1Q8IV48 349 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 PEX5LQ8IYB4 626 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 PRSS58Q8IYP2 241 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CYP4Z2PQ8N1L4 340 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 DEFB123Q8N688 67 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 LRRC17Q8N6Y2 441 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CLDN22Q8N7P3 220 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ARIH2OSQ8N7S6 290 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TMEM99Q8N816 258 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 BCORP1Q8N888 145 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ZFP41Q8N8Y5 198 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 Q8N9G6 341 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 Q8N9L7 120 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CDRT4Q8N9R6 151 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 LRRC75AQ8NAA5 344 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 CYB561A3Q8NBI2 242 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF540Q8NDQ6 660 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 FAM83FQ8NEG4 500 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SDR9C7Q8NEX9 313 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 OR6C4Q8NGE1 309 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 OR9Q1Q8NGQ5 310 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 OR13C5Q8NGS8 318 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 OR5J2Q8NH18 312 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 OR51Q1Q8NH59 317 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 OR4C6Q8NH72 309 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 WDR36Q8NI36 951 aaKnown RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 OCC1Q8TAD7 63 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF420Q8TAQ5 688 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 PIGXQ8TBF5 258 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 DYNC2LI1Q8TCX1 351 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RPS4Y2Q8TD47 263 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 GPR151Q8TDV0 419 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SAP25Q8TEE9 199 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RAB2BQ8WUD1 216 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RNF138Q8WVD3 245 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 TMEM239Q8WW34 195 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RASSF5Q8WWW0 418 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ACOT11Q8WXI4 607 aaPredicted RBP1.14□□□□□ -2.23
CCDC39-203ENST00000473854 LZICQ8WZA0 190 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RORBQ92753 470 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RIT1Q92963 219 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 SLC38A4Q969I6 547 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ST6GALNAC6Q969X2 333 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 ADIPOR1Q96A54 375 aa1.14□□□□□ -2.23
CCDC39-203ENST00000473854 RERGQ96A58 199 aaPredicted RBP1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms