RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 HPXP02790 462 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 H2AFB2P0C5Z0 115 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 MGMTP16455 207 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 RAB6AP20340 208 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 GABRR1P24046 479 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 RBMXP38159 391 aaKnown RBP5.38□□□□□ -1.55
CLK1-210ENST00000473565 SNU13P55769 128 aaKnown RBP5.38□□□□□ -1.55
CLK1-210ENST00000473565 PLP2Q04941 152 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 GUSBP1Q15486 140 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 TBR1Q16650 682 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 HACD4Q5VWC8 232 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 TMEM53Q6P2H8 277 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 COLCA1Q6ZS62 124 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 Q6ZSR3 168 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 CALHM1Q8IU99 346 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 CISD2Q8N5K1 135 aaKnown RBP5.38□□□□□ -1.55
CLK1-210ENST00000473565 PNLDC1Q8NA58 520 aaKnown RBP5.38□□□□□ -1.55
CLK1-210ENST00000473565 SLC30A7Q8NEW0 376 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 OR51T1Q8NGJ9 327 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 OR10R2Q8NGX6 335 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 GIMAP1Q8WWP7 306 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 AQP3Q92482 292 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 PPP1R14BQ96C90 147 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 PAPOLGQ9BWT3 736 aaKnown RBP5.38□□□□□ -1.55
CLK1-210ENST00000473565 RAXQ9Y2V3 346 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 FAM215AQ9Y5M1 114 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 HMX3A6NHT5 357 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 TNFSF13O75888 250 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 HTR3BO95264 441 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 ECDO95905 644 aaPredicted RBP5.37□□□□□ -1.55
CLK1-210ENST00000473565 LPLP06858 475 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 NAT2P11245 290 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 PSMB1P20618 241 aaKnown RBP5.37□□□□□ -1.55
CLK1-210ENST00000473565 APLNRP35414 380 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 ARR3P36575 388 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 RAD52P43351 418 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 ZP1P60852 638 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 MRPS10P82664 201 aaKnown RBP5.37□□□□□ -1.55
CLK1-210ENST00000473565 FCN2Q15485 313 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 OR8B8Q15620 311 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 GABRA6Q16445 453 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 ST3GAL2Q16842 350 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 CLVS2Q5SYC1 327 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 ZNF782Q6ZMW2 699 aaPredicted RBP5.37□□□□□ -1.55
CLK1-210ENST00000473565 BTN2A1Q7KYR7 527 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 MRPL21Q7Z2W9 205 aaKnown RBP5.37□□□□□ -1.55
CLK1-210ENST00000473565 GABRG1Q8N1C3 465 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 KCNG3Q8TAE7 436 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 DYRK2Q92630 601 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 BORCS8Q96FH0 119 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 ZNF75AQ96N20 296 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 SEC22CQ9BRL7 303 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 NUBP2Q9Y5Y2 271 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 PLCE1Q9P212 2302 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 PYCARD-AS1I3L0S3 204 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 DLL1O00548 723 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 GSTT2BP0CG30 244 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 AP3S2P59780 193 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 UBE2NP61088 152 aaKnown RBP5.37□□□□□ -1.55
CLK1-210ENST00000473565 TAF9Q16594 264 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 NKAPLQ5M9Q1 402 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 TMEM42Q69YG0 159 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 OR2T2Q6IF00 324 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 STEAP1BQ6NZ63 245 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 Q6ZT83 130 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 CXorf67Q86X51 503 aaPredicted RBP5.37□□□□□ -1.55
CLK1-210ENST00000473565 Q8NA96 180 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 OR52B4Q8NGK2 314 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 AKAP1Q92667 903 aaKnown RBP eCLIP5.37□□□□□ -1.55
CLK1-210ENST00000473565 WNT2BQ93097 391 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 SPSB4Q96A44 273 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 PTX4Q96A99 478 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 STARD4Q96DR4 205 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 RAB3CQ96E17 227 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 GPR137Q96N19 417 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 S100A13Q99584 98 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 REPIN1Q9BWE0 567 aaKnown RBP5.37□□□□□ -1.55
CLK1-210ENST00000473565 ZNF230Q9UIE0 474 aaPredicted RBP5.37□□□□□ -1.55
CLK1-210ENST00000473565 ZNF221Q9UK13 617 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 BOLA1Q9Y3E2 137 aa5.37□□□□□ -1.55
CLK1-210ENST00000473565 ZNF816-ZNF321PA0A0X1KG74 233 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 XRCC2O43543 280 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 DHFRP00374 187 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 SERPINA5P05154 406 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 SFTPBP07988 381 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 CXCL3P19876 107 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 BLVRBP30043 206 aaPredicted RBP5.36□□□□□ -1.55
CLK1-210ENST00000473565 HOXD11P31277 338 aaPredicted RBP5.36□□□□□ -1.55
CLK1-210ENST00000473565 RBP2P50120 134 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 GPM6AP51674 278 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 UBE2MP61081 183 aaKnown RBP5.36□□□□□ -1.55
CLK1-210ENST00000473565 RPS27AP62979 156 aaKnown RBP5.36□□□□□ -1.55
CLK1-210ENST00000473565 PRDX4Q13162 271 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 ALKBH6Q3KRA9 238 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 PIGYQ3MUY2 71 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 C6orf201Q7Z4U5 140 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 HPSE2Q8WWQ2 592 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 APOBEC3DQ96AK3 386 aaPredicted RBP5.36□□□□□ -1.55
CLK1-210ENST00000473565 HS3ST6Q96QI5 342 aa5.36□□□□□ -1.55
CLK1-210ENST00000473565 C7orf50Q9BRJ6 194 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms