RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 USF2Q15853 346 aaPredicted RBP8.94□□□□□ -0.98
APTX-216ENST00000472896 DUSP5Q16690 384 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 ZNF674Q2M3X9 581 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 ELOA3BQ3SY89 546 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 KHDC3LQ587J8 217 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 EXOSC6Q5RKV6 272 aaKnown RBP8.94□□□□□ -0.98
APTX-216ENST00000472896 LINC00114Q6XXX2 140 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 LRRC25Q8N386 305 aaPredicted RBP8.94□□□□□ -0.98
APTX-216ENST00000472896 C2orf73Q8N5S3 287 aaPredicted RBP8.94□□□□□ -0.98
APTX-216ENST00000472896 ELOA3Q8NG57 546 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 OR2L5Q8NG80 312 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 OR5AR1Q8NGP9 310 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 OR5K2Q8NHB8 316 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 TSEN15Q8WW01 171 aaKnown RBP8.94□□□□□ -0.98
APTX-216ENST00000472896 ZNRF4Q8WWF5 429 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 MRGPRFQ96AM1 343 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 C4orf45Q96LM5 186 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 NMNAT3Q96T66 252 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 NUDT16L1Q9BRJ7 211 aaKnown RBP8.94□□□□□ -0.98
APTX-216ENST00000472896 AICDAQ9GZX7 198 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 SLC26A1Q9H2B4 701 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 ARV1Q9H2C2 271 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 OR5AC2Q9NZP5 309 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 CKLFQ9UBR5 152 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 TCFL5Q9UL49 500 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 PLAGL1Q9UM63 463 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 KCNK6Q9Y257 313 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 MRPS18BQ9Y676 258 aaKnown RBP8.94□□□□□ -0.98
APTX-216ENST00000472896 A0A1B0GWA3 101 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 A0A1W2PPV9 198 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 SMCO3A2RU48 225 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 CEACAM18A8MTB9 384 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 PRSS47A8MTI9 375 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 B4E171 279 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 TNFRSF10CO14798 259 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 ERI3O43414 337 aaKnown RBP8.94□□□□□ -0.98
APTX-216ENST00000472896 KCNAB3O43448 404 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 LDB3O75112 727 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 MBP02144 154 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 GUSBP08236 651 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 IFI6P09912 130 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 ELFN1P0C7U0 828 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 ZNF84P51523 738 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 PRPS1P60891 318 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 TNFRSF9Q07011 255 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 IL15RAQ13261 267 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 SQSTM1Q13501 440 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 TRA2AQ13595 282 aaKnown RBP eCLIP8.94□□□□□ -0.98
APTX-216ENST00000472896 JOSD1Q15040 202 aaPredicted RBP8.94□□□□□ -0.98
APTX-216ENST00000472896 EBPQ15125 230 aaKnown RBP8.94□□□□□ -0.98
APTX-216ENST00000472896 OR8G1Q15617 311 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 ZNF260Q3ZCT1 412 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 DCST2Q5T1A1 773 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 DCAF12Q5T6F0 453 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 SPNS3Q6ZMD2 512 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 PEG10Q86TG7 708 aaKnown RBP8.94□□□□□ -0.98
APTX-216ENST00000472896 HOGA1Q86XE5 327 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 POC1AQ8NBT0 407 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 ADAD2Q8NCV1 583 aaKnown RBP8.94□□□□□ -0.98
APTX-216ENST00000472896 OR10AD1Q8NGE0 317 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 RNASEH2CQ8TDP1 164 aaKnown RBP8.94□□□□□ -0.98
APTX-216ENST00000472896 HPSE2Q8WWQ2 592 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 EIF5A2Q9GZV4 153 aaKnown RBP8.94□□□□□ -0.98
APTX-216ENST00000472896 OR2AG1Q9H205 316 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 LAMP5Q9UJQ1 280 aa8.94□□□□□ -0.98
APTX-216ENST00000472896 ESPL1Q14674 2120 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 NUP210LQ5VU65 1888 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 IGHV1OR21-1A0A087WYE8 117 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 A6NJY4 79 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 PSMD9O00233 223 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 ZNF354AO60765 605 aaPredicted RBP8.93□□□□□ -0.98
APTX-216ENST00000472896 HIST1H2BKO60814 126 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 HIST1H2BJP06899 126 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 DANCRP0C864 163 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 ST6GAL1P15907 406 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 HIST1H2BOP23527 126 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 HIST1H2BBP33778 126 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 HIST1H2BDP58876 126 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 BPIFB3P59826 476 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 HIST1H2BCP62807 126 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 PRDX1Q06830 199 aaKnown RBP8.93□□□□□ -0.98
APTX-216ENST00000472896 HIST2H2BEQ16778 126 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 MIDNQ504T8 468 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.93□□□□□ -0.98
APTX-216ENST00000472896 AKR1C8PQ5T2L2 129 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 MED25Q71SY5 747 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 TRAPPC6BQ86SZ2 158 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 MRPL52Q86TS9 123 aaKnown RBP8.93□□□□□ -0.98
APTX-216ENST00000472896 FJX1Q86VR8 437 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 AMZ2Q86W34 360 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 ZNF563Q8TA94 476 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 CD300LFQ8TDQ1 290 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 ST7LQ8TDW4 575 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 GRHL3Q8TE85 626 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 HIST1H2BHQ93079 126 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 GAL3ST3Q96A11 431 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 NTNG2Q96CW9 530 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 HIST1H2BNQ99877 126 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 HIST1H2BMQ99879 126 aa8.93□□□□□ -0.98
APTX-216ENST00000472896 C20orf24Q9BUV8 137 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms