RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 BTN1A1Q13410 526 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 HSP90AA4PQ58FG1 418 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 MED27Q6P2C8 311 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 SPINT4Q6UDR6 99 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 SLC7A5P1Q8MH63 180 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 ORMDL3Q8N138 153 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 STK40Q8N2I9 435 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 LINC00469Q8N7U9 141 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 ZNF321PQ8N8H1 164 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 SLC25A29Q8N8R3 303 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 OR5M1Q8NGP8 315 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 OR6K6Q8NGW6 343 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 SFXN5Q8TD22 340 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 BAALCQ8WXS3 180 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 OR8D1Q8WZ84 308 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 ZFP3Q96NJ6 502 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 KPTNQ9Y664 436 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 BRWD3Q6RI45 1802 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 SBNO1A3KN83 1393 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 CCL15-CCL14A0A0B4J2E2 113 aa2.57□□□□□ -2
PRPF40A-208ENST00000472760 PRAMEF26H0Y7S4 382 aa2.57□□□□□ -2
PRPF40A-208ENST00000472760 MAS1P04201 325 aa2.57□□□□□ -2
PRPF40A-208ENST00000472760 CD28P10747 220 aa2.57□□□□□ -2
PRPF40A-208ENST00000472760 PRSS3P35030 304 aa2.57□□□□□ -2
PRPF40A-208ENST00000472760 ST3GAL4Q11206 333 aa2.57□□□□□ -2
PRPF40A-208ENST00000472760 MAD2L1BPQ15013 274 aaPredicted RBP2.57□□□□□ -2
PRPF40A-208ENST00000472760 CCL15Q16663 113 aa2.57□□□□□ -2
PRPF40A-208ENST00000472760 TMEM234Q8WY98 164 aa2.57□□□□□ -2
PRPF40A-208ENST00000472760 S100PBPQ96BU1 408 aa2.57□□□□□ -2
PRPF40A-208ENST00000472760 MRPL48Q96GC5 212 aaKnown RBP2.57□□□□□ -2
PRPF40A-208ENST00000472760 GABRG3Q99928 467 aa2.57□□□□□ -2
PRPF40A-208ENST00000472760 BCL7BQ9BQE9 202 aa2.57□□□□□ -2
PRPF40A-208ENST00000472760 PLEKHF2Q9H8W4 249 aa2.57□□□□□ -2
PRPF40A-208ENST00000472760 FANCEQ9HB96 536 aa2.57□□□□□ -2
PRPF40A-208ENST00000472760 LZTFL1Q9NQ48 299 aa2.57□□□□□ -2
PRPF40A-208ENST00000472760 ZNF608Q9ULD9 1512 aaPredicted RBP2.57□□□□□ -2
PRPF40A-208ENST00000472760 TRAV8-4A0A0B4J246 113 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 A0A1W2PPV4 95 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 MFNGO00587 321 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 OR7C2O60412 319 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 SMC2O95347 1197 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 P01737 135 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 MMP7P09237 267 aaPredicted RBP2.56□□□□□ -2
PRPF40A-208ENST00000472760 RNASE2P10153 161 aaKnown RBP2.56□□□□□ -2
PRPF40A-208ENST00000472760 HOXB8P17481 243 aaPredicted RBP2.56□□□□□ -2
PRPF40A-208ENST00000472760 NELFEP18615 380 aaKnown RBP2.56□□□□□ -2
PRPF40A-208ENST00000472760 IL3RAP26951 378 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 IDH2P48735 452 aaKnown RBP2.56□□□□□ -2
PRPF40A-208ENST00000472760 RBX1P62877 108 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 HHATQ5VTY9 493 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 OR51L1Q8NGJ5 315 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 KLF14Q8TD94 323 aaPredicted RBP2.56□□□□□ -2
PRPF40A-208ENST00000472760 TFGQ92734 400 aaPredicted RBP2.56□□□□□ -2
PRPF40A-208ENST00000472760 SMARCD1Q96GM5 515 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 TBL1XR1Q9BZK7 514 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 OR51B5Q9H339 312 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 FBXO44Q9H4M3 255 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 KIR3DX1Q9H7L2 352 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 IL37Q9NZH6 218 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 PPIL1Q9Y3C6 166 aa2.56□□□□□ -2
PRPF40A-208ENST00000472760 TRAV8-6A0A0B4J262 113 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 CNMDO75829 334 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 ETHE1O95571 254 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 IVDP26440 423 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 HCCSP53701 268 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 PSMC5P62195 406 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 SLC35B1P78383 322 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 ELF3P78545 371 aaPredicted RBP2.55□□□□□ -2
PRPF40A-208ENST00000472760 ADIGQ0VDE8 80 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 MAPRE2Q15555 327 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 ATP6V1FQ16864 119 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 CPTPQ5TA50 214 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 CALHM3Q86XJ0 350 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 ARHGAP18Q8N392 663 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 CYB561A3Q8NBI2 242 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 OR1P1Q8NH06 330 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 STMN4Q9H169 189 aaPredicted RBP2.55□□□□□ -2
PRPF40A-208ENST00000472760 DHX35Q9H5Z1 703 aaKnown RBP2.55□□□□□ -2
PRPF40A-208ENST00000472760 C6orf50Q9HD87 102 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 JCADQ9P266 1359 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 DHCR7Q9UBM7 475 aaKnown RBP2.55□□□□□ -2
PRPF40A-208ENST00000472760 VAX2Q9UIW0 290 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 RAB22AQ9UL26 194 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 FLVCR2Q9UPI3 526 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 ENPP4Q9Y6X5 453 aa2.55□□□□□ -2
PRPF40A-208ENST00000472760 NPHP4O75161 1426 aaPredicted RBP2.54□□□□□ -2
PRPF40A-208ENST00000472760 LOC102724200A0A096LPH7 203 aaPredicted RBP2.54□□□□□ -2
PRPF40A-208ENST00000472760 IGHV6-1A0A0B4J1U7 121 aa2.54□□□□□ -2
PRPF40A-208ENST00000472760 IGHV2OR16-5A0A0B4J2B6 119 aa2.54□□□□□ -2
PRPF40A-208ENST00000472760 A0A0G2JMP0 313 aa2.54□□□□□ -2
PRPF40A-208ENST00000472760 A0A0X1KG70 313 aa2.54□□□□□ -2
PRPF40A-208ENST00000472760 C16orf90A8MZG2 172 aa2.54□□□□□ -2
PRPF40A-208ENST00000472760 H7C2Y5 167 aa2.54□□□□□ -2
PRPF40A-208ENST00000472760 PLEKHA8P1O95397 391 aa2.54□□□□□ -2
PRPF40A-208ENST00000472760 MPIP34949 423 aa2.54□□□□□ -2
PRPF40A-208ENST00000472760 GALR1P47211 349 aa2.54□□□□□ -2
PRPF40A-208ENST00000472760 PSMB2P49721 201 aa2.54□□□□□ -2
PRPF40A-208ENST00000472760 FLI1Q01543 452 aaPredicted RBP2.54□□□□□ -2
PRPF40A-208ENST00000472760 C16orf47Q6ZP98 133 aaPredicted RBP2.54□□□□□ -2
PRPF40A-208ENST00000472760 BBS7Q8IWZ6 715 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms