RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 SLC7A6Q92536 515 aa7.65□□□□□ -1.18
SF3A1-206ENST00000471037 GTF3AQ92664 365 aaKnown RBP7.65□□□□□ -1.18
SF3A1-206ENST00000471037 GHSRQ92847 366 aa7.65□□□□□ -1.18
SF3A1-206ENST00000471037 TMIGD2Q96BF3 282 aa7.65□□□□□ -1.18
SF3A1-206ENST00000471037 YIPF6Q96EC8 236 aa7.65□□□□□ -1.18
SF3A1-206ENST00000471037 PGLYRP3Q96LB9 341 aa7.65□□□□□ -1.18
SF3A1-206ENST00000471037 GAL3ST1Q99999 423 aa7.65□□□□□ -1.18
SF3A1-206ENST00000471037 PBOV1Q9GZY1 135 aa7.65□□□□□ -1.18
SF3A1-206ENST00000471037 OR51B6Q9H340 312 aa7.65□□□□□ -1.18
SF3A1-206ENST00000471037 C7orf69Q9H7B7 122 aa7.65□□□□□ -1.18
SF3A1-206ENST00000471037 ZMAT3Q9HA38 289 aaKnown RBP7.65□□□□□ -1.18
SF3A1-206ENST00000471037 NDUFA13Q9P0J0 144 aa7.65□□□□□ -1.18
SF3A1-206ENST00000471037 FRRS1LQ9P0K9 344 aa7.65□□□□□ -1.18
SF3A1-206ENST00000471037 ZNF391Q9UJN7 358 aa7.65□□□□□ -1.18
SF3A1-206ENST00000471037 SIRT4Q9Y6E7 314 aaPredicted RBP7.65□□□□□ -1.18
SF3A1-206ENST00000471037 A0A0U1RQV5 110 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 PNMA8CA0A1B0GUJ8 204 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 SMIM31A0A1B0GVY4 71 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 TPD52L2O43399 206 aaKnown RBP7.64□□□□□ -1.19
SF3A1-206ENST00000471037 ZFPL1O95159 310 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 SERPINA3P01011 423 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 IGHV1-46P01743 117 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 TTRP02766 147 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 LCATP04180 440 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 ISG15P05161 165 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 GALP22466 123 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 CCNOP22674 350 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 KIR3DL2P43630 455 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 ZNF81P51508 661 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 MMP15P51511 669 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 YIF1BQ5BJH7 314 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 TMEM244Q5VVB8 128 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 UNQ6126/PRO20091Q6UXV3 157 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 COLCA1Q6ZS62 124 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 FAM57BQ71RH2 274 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 DOK3Q7L591 496 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 ANKRD13BQ86YJ7 626 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 ZNF101Q8IZC7 436 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 PRSS35Q8N3Z0 413 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 ZNF676Q8N7Q3 588 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 CCDC54Q8NEL0 328 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 DEFB108BQ8NET1 73 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 OR8B12Q8NGG6 310 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 OR1J1Q8NGS3 322 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 THRSPQ92748 146 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 ITFG2Q969R8 447 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 APOBEC3DQ96AK3 386 aaPredicted RBP7.64□□□□□ -1.19
SF3A1-206ENST00000471037 PGAM5Q96HS1 289 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 C1QTNF5Q9BXJ0 243 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 OR10A2Q9H208 303 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 RGCCQ9H4X1 137 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 BRD7Q9NPI1 651 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 TBCCD1Q9NVR7 557 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 EIF3KQ9UBQ5 218 aaKnown RBP7.64□□□□□ -1.19
SF3A1-206ENST00000471037 CGGBP1Q9UFW8 167 aaPredicted RBP7.64□□□□□ -1.19
SF3A1-206ENST00000471037 STUB1Q9UNE7 303 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 GTF2A1LQ9UNN4 478 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 ZNF281Q9Y2X9 895 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 POLR3KQ9Y2Y1 108 aaPredicted RBP7.64□□□□□ -1.19
SF3A1-206ENST00000471037 SF3B6Q9Y3B4 125 aaKnown RBP7.64□□□□□ -1.19
SF3A1-206ENST00000471037 PPIAL4AQ9Y536 164 aa7.64□□□□□ -1.19
SF3A1-206ENST00000471037 ZSCAN5BA6NJL1 495 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 H3BSA7 217 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 TBX1O43435 398 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 XRCC2O43543 280 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 NOL3O60936 208 aaKnown RBP7.63□□□□□ -1.19
SF3A1-206ENST00000471037 FOXH1O75593 365 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 IGLV3-1P01715 115 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 HLA-DPB1P04440 258 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 CD55P08174 381 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 SLC2A1P11166 492 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 ZNF12P17014 697 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 CFL1P23528 166 aaKnown RBP7.63□□□□□ -1.19
SF3A1-206ENST00000471037 PRTN3P24158 256 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 GCH1P30793 250 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 WNT5AP41221 380 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 RPS25P62851 125 aaKnown RBP7.63□□□□□ -1.19
SF3A1-206ENST00000471037 ZNF718Q3SXZ3 478 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 TMEM255AQ5JRV8 349 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 GPR107Q5VW38 600 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 MBNL2Q5VZF2 373 aaKnown RBP7.63□□□□□ -1.19
SF3A1-206ENST00000471037 CD200R1LQ6Q8B3 271 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 RBMS3Q6XE24 437 aaKnown RBP7.63□□□□□ -1.19
SF3A1-206ENST00000471037 GDPGP1Q6ZNW5 385 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 C1orf174Q8IYL3 243 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 SIGLECL1Q8N7X8 197 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 OR5L1Q8NGL2 311 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 ZNF420Q8TAQ5 688 aaPredicted RBP7.63□□□□□ -1.19
SF3A1-206ENST00000471037 GPR148Q8TDV2 347 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 C22orf15Q8WYQ4 148 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 PHYHIPQ92561 330 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 CCL17Q92583 94 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 MARS2Q96GW9 593 aaKnown RBP7.63□□□□□ -1.19
SF3A1-206ENST00000471037 DIRC2Q96SL1 478 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 PDCD1LG2Q9BQ51 273 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 BCL7BQ9BQE9 202 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 TMED9Q9BVK6 235 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 FUNDC2Q9BWH2 189 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 OPA3Q9H6K4 179 aa7.63□□□□□ -1.19
SF3A1-206ENST00000471037 CYSLTR2Q9NS75 346 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms