RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 C1orf100Q5SVJ3 147 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 ASPHD2Q6ICH7 369 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 MEX3BQ6ZN04 569 aaKnown RBP8.36□□□□□ -1.07
CCM2-204ENST00000470837 NR2C2APQ86WQ0 139 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 SAMD12Q8N8I0 201 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 OR5P3Q8WZ94 311 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 RFT1Q96AA3 541 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 FAM3DQ96BQ1 224 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 SPACA5Q96QH8 159 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 SLC30A2Q9BRI3 323 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 NXF2Q9GZY0 626 aaKnown RBP8.36□□□□□ -1.07
CCM2-204ENST00000470837 CST11Q9H112 138 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 METTL9Q9H1A3 318 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 CXXC4Q9H2H0 198 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 CNTD2Q9H8S5 307 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 HMG20AQ9NP66 347 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 FAIMQ9NVQ4 179 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 TAAR3PQ9P1P4 343 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 SPATA2Q9UM82 520 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 ING4Q9UNL4 249 aa8.36□□□□□ -1.07
CCM2-204ENST00000470837 METTL21EPA6NDL7 271 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 TMEM210A6NLX4 147 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 PYCARD-AS1I3L0S3 204 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 J3QKU1 62 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 ZNF780AO75290 641 aaPredicted RBP8.35□□□□□ -1.07
CCM2-204ENST00000470837 GOSR1O95249 250 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 PAHP00439 452 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 PLATP00750 562 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 CSTBP04080 98 aaKnown RBP8.35□□□□□ -1.07
CCM2-204ENST00000470837 BMP4P12644 408 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 CFPP27918 469 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 APOBEC3AP31941 199 aaPredicted RBP8.35□□□□□ -1.07
CCM2-204ENST00000470837 HAAOP46952 286 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 EVX1P49640 407 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 ZNF81P51508 661 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 ART1P52961 327 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 LSAMPQ13449 338 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 RSU1Q15404 277 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 ALKBH6Q3KRA9 238 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 DMRTC1Q5HYR2 192 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 UBE2NLQ5JXB2 153 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 GLIPR1L1Q6UWM5 242 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 KRT74Q7RTS7 529 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 LRRC28Q86X40 367 aaPredicted RBP8.35□□□□□ -1.07
CCM2-204ENST00000470837 DMRTC2Q8IXT2 367 aaPredicted RBP8.35□□□□□ -1.07
CCM2-204ENST00000470837 MKXQ8IYA7 352 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 FBXL14Q8N1E6 418 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 OR2Z1Q8NG97 314 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 OR51D1Q8NGF3 324 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 OR5D18Q8NGL1 313 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 OR6Q1Q8NGQ2 317 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 KCNG3Q8TAE7 436 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 LGALS14Q8TCE9 139 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 S100A16Q96FQ6 103 aaKnown RBP8.35□□□□□ -1.07
CCM2-204ENST00000470837 DIRAS2Q96HU8 199 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 CMTM3Q96MX0 182 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 DIRC2Q96SL1 478 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 GFI1Q99684 422 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 DHRS9Q9BPW9 319 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 MRPL37Q9BZE1 423 aaKnown RBP8.35□□□□□ -1.07
CCM2-204ENST00000470837 WDR12Q9GZL7 423 aaKnown RBP8.35□□□□□ -1.07
CCM2-204ENST00000470837 DYNLRB1Q9NP97 96 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 CISD1Q9NZ45 108 aaKnown RBP8.35□□□□□ -1.07
CCM2-204ENST00000470837 FBXO9Q9UK97 447 aaPredicted RBP8.35□□□□□ -1.07
CCM2-204ENST00000470837 ZDHHC8Q9ULC8 765 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 POLDIP2Q9Y2S7 368 aa8.35□□□□□ -1.07
CCM2-204ENST00000470837 IGLV3-9A0A075B6K5 115 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 A0A0B4J203 849 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 PQLC2LA1A4F0 135 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 LRP5LA4QPB2 252 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 A6NLC8 198 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 SHISA9B4DS77 424 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 B9A039 149 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 TRAPPC2LH3BP13 241 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 M0R233 179 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 CTDSP2O14595 271 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 TPD52L2O43399 206 aaKnown RBP8.34□□□□□ -1.07
CCM2-204ENST00000470837 HPGDSO60760 199 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 CRTAPO75718 401 aaPredicted RBP8.34□□□□□ -1.07
CCM2-204ENST00000470837 SCGNO76038 276 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 APOA1P02647 267 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 OR3A4PP47883 348 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 SRP9P49458 86 aaKnown RBP8.34□□□□□ -1.07
CCM2-204ENST00000470837 SNRPD2P62316 118 aaKnown RBP8.34□□□□□ -1.07
CCM2-204ENST00000470837 ZNF846Q147U1 533 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 ADIPOQQ15848 244 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 C2orf76Q3KRA6 126 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 ZNF672Q499Z4 452 aaPredicted RBP8.34□□□□□ -1.07
CCM2-204ENST00000470837 SLC22A6Q4U2R8 563 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 OR2W3Q7Z3T1 314 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 LRP11Q86VZ4 500 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 ZSCAN4Q8NAM6 433 aaPredicted RBP8.34□□□□□ -1.07
CCM2-204ENST00000470837 OR10AD1Q8NGE0 317 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 OR4D6Q8NGJ1 314 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 OR51F2Q8NH61 342 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 TBC1D15Q8TC07 691 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 RAB40AQ8WXH6 277 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 DVL3Q92997 716 aaPredicted RBP8.34□□□□□ -1.07
CCM2-204ENST00000470837 ITPKCQ96DU7 683 aa8.34□□□□□ -1.07
CCM2-204ENST00000470837 ELMOD3Q96FG2 381 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms