RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 PCDHGB1Q9Y5G3 927 aa11.78□□□□□ -0.52
TOP3B-215ENST00000470338 AUP1Q9Y679 476 aa11.78□□□□□ -0.52
TOP3B-215ENST00000470338 IGHV2-70DA0A0C4DH43 119 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 KIR2DS1A0A191URI9 304 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 OR5B21A6NL26 309 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 ZNF732B4DXR9 585 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 P2RY10O00398 339 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 NRASP01111 189 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 GYPAP02724 150 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 GPM6AP51674 278 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 GNG3P63215 75 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 GABPB1Q06547 395 aaPredicted RBP11.77□□□□□ -0.53
TOP3B-215ENST00000470338 SCGB2A2Q13296 93 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 MICBQ29980 383 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 CDONQ4KMG0 1287 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 TP53I3Q53FA7 332 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 CEP78Q5JTW2 689 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 KCTD8Q6ZWB6 473 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 MOB3CQ70IA8 216 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 DOK3Q7L591 496 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 TMEM158Q8WZ71 300 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 C12orf43Q96C57 262 aaKnown RBP11.77□□□□□ -0.53
TOP3B-215ENST00000470338 LGALS12Q96DT0 336 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 Q96MT0 163 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 OR51I2Q9H344 312 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 SMPD3Q9NY59 655 aaPredicted RBP11.77□□□□□ -0.53
TOP3B-215ENST00000470338 ERVK-18Q9QC07 812 aa11.77□□□□□ -0.53
TOP3B-215ENST00000470338 DNHD1Q96M86 4753 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 IGHV3OR15-7A0A075B7D8 119 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 DAPL1A0PJW8 107 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 ADAM20O43506 726 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 TCF21O43680 179 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 FCN3O75636 299 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 PPIAL4GP0DN37 164 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 DBTP11182 482 aaKnown RBP11.76□□□□□ -0.53
TOP3B-215ENST00000470338 ZNF91Q05481 1191 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 WDR38Q5JTN6 314 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 CLVS2Q5SYC1 327 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 ATPAF1Q5TC12 328 aaPredicted RBP11.76□□□□□ -0.53
TOP3B-215ENST00000470338 FDX2Q6P4F2 183 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 PRSS35Q8N3Z0 413 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 ACBD7Q8N6N7 88 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 CCDC54Q8NEL0 328 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 MRI1Q9BV20 369 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 C8orf4Q9NR00 106 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 ACOXLQ9NUZ1 547 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 MRPS18AQ9NVS2 196 aaKnown RBP11.76□□□□□ -0.53
TOP3B-215ENST00000470338 GNG8Q9UK08 70 aa11.76□□□□□ -0.53
TOP3B-215ENST00000470338 A0A0A6YYJ9 748 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 RNF212BA8MTL3 300 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 EPHA1P21709 976 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 KIR3DL2P43630 455 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 OR12D2P58182 307 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 RCN1Q15293 331 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 ODF4Q2M2E3 257 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 C11orf91Q3C1V1 193 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 DMRTC1Q5HYR2 192 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 CD276Q5ZPR3 534 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 PLCXD3Q63HM9 321 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 LPCAT4Q643R3 524 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 BTNL3Q6UXE8 466 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 FAM220AQ7Z4H9 259 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 EGFL6Q8IUX8 553 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 PACRGLQ8N7B6 248 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 ZNF555Q8NEP9 628 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 APH1BQ8WW43 257 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 AQP3Q92482 292 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 SEH1LQ96EE3 360 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 NUDT16L1Q9BRJ7 211 aaKnown RBP11.75□□□□□ -0.53
TOP3B-215ENST00000470338 WDR13Q9H1Z4 485 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 RASSF4Q9H2L5 321 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 OCEL1Q9H607 264 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 SMURF1Q9HCE7 757 aa11.75□□□□□ -0.53
TOP3B-215ENST00000470338 A0A1B0GVI7 797 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 C22orf46C9J442 243 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 ANKRD65E5RJM6 399 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 DVL1O14640 695 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 TMPRSS2O15393 492 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 AKR7A2O43488 359 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 SYT7O43581 403 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 WBP4O75554 376 aaKnown RBP11.74□□□□□ -0.53
TOP3B-215ENST00000470338 RHBDL1O75783 438 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 IGHA1P01876 353 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 AMY2BP19961 511 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 TGM4P49221 684 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 ELF3P78545 371 aaPredicted RBP11.74□□□□□ -0.53
TOP3B-215ENST00000470338 SRSF2Q01130 221 aaKnown RBP11.74□□□□□ -0.53
TOP3B-215ENST00000470338 RAB40BQ12829 278 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 GALEQ14376 348 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 LRRC36Q1X8D7 754 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 TUSC1Q2TAM9 212 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 KRTAP24-1Q3LI83 254 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 KLF17Q5JT82 389 aaPredicted RBP11.74□□□□□ -0.53
TOP3B-215ENST00000470338 STUMQ69YW2 141 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 USP43Q70EL4 1123 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 OR2G2Q8NGZ5 317 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 SPATA3Q8NHX4 192 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 ZNF671Q8TAW3 534 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 TECTBQ96PL2 329 aa11.74□□□□□ -0.53
TOP3B-215ENST00000470338 CCL13Q99616 98 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms