RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 RANBP1P43487 201 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 KLF3P57682 345 aaPredicted RBP6.95□□□□□ -1.3
NPHP3-204ENST00000469232 PPP3R1P63098 170 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 QRFPP83859 136 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 HNRNPA0Q13151 305 aaKnown RBP6.95□□□□□ -1.3
NPHP3-204ENST00000469232 PRDX4Q13162 271 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 CNN3Q15417 329 aaKnown RBP6.95□□□□□ -1.3
NPHP3-204ENST00000469232 MST1LQ2TV78 715 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 GFOD2Q3B7J2 385 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 SPATA46Q5T0L3 261 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 GLT8D1Q68CQ7 371 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 Q6ZR03 302 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 LRP11Q86VZ4 500 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 COMMD2Q86X83 199 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 SPERTQ8NA61 448 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 OR6M1Q8NGM8 313 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 ZC3HAV1LQ96H79 300 aaKnown RBP6.95□□□□□ -1.3
NPHP3-204ENST00000469232 WDFY2Q96P53 400 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 DCUN1D5Q9BTE7 237 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 MRPL37Q9BZE1 423 aaKnown RBP6.95□□□□□ -1.3
NPHP3-204ENST00000469232 PLEKHA1Q9HB21 404 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 RALYQ9UKM9 306 aaKnown RBP6.95□□□□□ -1.3
NPHP3-204ENST00000469232 AK6Q9Y3D8 172 aaKnown RBP6.95□□□□□ -1.3
NPHP3-204ENST00000469232 CMAHPQ9Y471 501 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 TENM4Q6N022 2769 aa6.95□□□□□ -1.3
NPHP3-204ENST00000469232 HRNRQ86YZ3 2850 aaPredicted RBP6.95□□□□□ -1.3
NPHP3-204ENST00000469232 RAI1Q7Z5J4 1906 aaPredicted RBP6.95□□□□□ -1.3
NPHP3-204ENST00000469232 A6NIN4 97 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 ANKRD30BLA7E2S9 258 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 MLNRO43193 412 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 CLPXO76031 633 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 CD55P08174 381 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 CALCBP10092 127 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 COL8A1P27658 744 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 GCH1P30793 250 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 SOX6P35712 828 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 ETV6P41212 452 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 CD200P41217 278 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 CAPZA1P52907 286 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 CAV3P56539 151 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 MXD1Q05195 221 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 SNTB1Q13884 538 aaKnown RBP6.94□□□□□ -1.3
NPHP3-204ENST00000469232 KISS1Q15726 138 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 MOGQ16653 247 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 SWI5Q1ZZU3 235 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 ZNF404Q494X3 552 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 ZNF672Q499Z4 452 aaPredicted RBP6.94□□□□□ -1.3
NPHP3-204ENST00000469232 LHFPL2Q6ZUX7 228 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 RNF144BQ7Z419 303 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 TMEM200AQ86VY9 491 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 ZDHHC23Q8IYP9 409 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 SAXO1Q8IYX7 474 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 CELF2-AS1Q8N7Q2 184 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 ZSCAN4Q8NAM6 433 aaPredicted RBP6.94□□□□□ -1.3
NPHP3-204ENST00000469232 PXT1Q8NFP0 134 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 OR6Q1Q8NGQ2 317 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 OR13G1Q8NGZ3 307 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 IGFBPL1Q8WX77 278 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 PTX4Q96A99 478 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 DHRS9Q9BPW9 319 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 SOSTQ9BQB4 213 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 OR51B6Q9H340 312 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 PLK3Q9H4B4 646 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 PPP1R3EQ9H7J1 279 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 NEK6Q9HC98 313 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 GPR173Q9NS66 373 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 CYSLTR2Q9NS75 346 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 IL36GQ9NZH8 169 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 MYEF2Q9P2K5 600 aaKnown RBP6.94□□□□□ -1.3
NPHP3-204ENST00000469232 GHRLQ9UBU3 117 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 GPR160Q9UJ42 338 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 ETV7Q9Y603 341 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 HELZ2Q9BYK8 2649 aaKnown RBP6.94□□□□□ -1.3
NPHP3-204ENST00000469232 A0A1W2PPR1 153 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 TMEM210A6NLX4 147 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 ANXA2P2A6NMY6 339 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 ZNF850A8MQ14 1090 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 NCR1O76036 304 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 MAS1P04201 325 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 INHBBP09529 407 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 OR4A8P0C604 315 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 APOBEC3AP31941 199 aaPredicted RBP6.94□□□□□ -1.3
NPHP3-204ENST00000469232 CFHR2P36980 270 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 GATA4P43694 442 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 RBP2P50120 134 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 FABP6P51161 128 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 GNG3P63215 75 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 LSAMPQ13449 338 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 DDI2Q5TDH0 399 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 SLC22A25Q6T423 547 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 DTX2Q86UW9 622 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 OR4D6Q8NGJ1 314 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 TBC1D15Q8TC07 691 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 PIGCQ92535 297 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 AP3S1Q92572 193 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 CPNE2Q96FN4 548 aaPredicted RBP6.94□□□□□ -1.3
NPHP3-204ENST00000469232 SORCS2Q96PQ0 1159 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 PAPOLGQ9BWT3 736 aaKnown RBP6.94□□□□□ -1.3
NPHP3-204ENST00000469232 PKIBQ9C010 78 aa6.94□□□□□ -1.3
NPHP3-204ENST00000469232 MIXL1Q9H2W2 232 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms