RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 LRP5LA4QPB2 252 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 ANKRD61A6NGH8 418 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 ZNF732B4DXR9 585 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 CYB5R3P00387 301 aaPredicted RBP10.06□□□□□ -0.8
VPS13D-204ENST00000469054 SERPINA3P01011 423 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 MT-ND2P03891 347 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 GPM6AP51674 278 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 CHN2P52757 468 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 GNG3P63215 75 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 DMRTC1Q5HYR2 192 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 PLCXD3Q63HM9 321 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 DMKNQ6E0U4 476 aaPredicted RBP10.06□□□□□ -0.8
VPS13D-204ENST00000469054 KCTD8Q6ZWB6 473 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 C1orf87Q8N0U7 546 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 OR51A4Q8NGJ6 313 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 PP6455Q8WZ26 134 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 FGGYQ96C11 551 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 SMIM19Q96E16 107 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 ADAT3Q96EY9 351 aaPredicted RBP10.06□□□□□ -0.8
VPS13D-204ENST00000469054 CHST5Q9GZS9 411 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 CCDC90BQ9GZT6 254 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 TLNRD1Q9H1K6 362 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 RNF7Q9UBF6 113 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 ZNF281Q9Y2X9 895 aa10.06□□□□□ -0.8
VPS13D-204ENST00000469054 PPIAL4EA0A075B759 164 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 OR5B21A6NL26 309 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 PPIAL4DF5H284 164 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 CDIPTO14735 213 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 WNT9BO14905 357 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 GATBO75879 557 aaKnown RBP10.05□□□□□ -0.8
VPS13D-204ENST00000469054 IGHV2-70P01814 119 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 PPIAL4FP0DN26 164 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 ZNF20P17024 532 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 EEF1B2P24534 225 aaKnown RBP10.05□□□□□ -0.8
VPS13D-204ENST00000469054 BTG1P62324 171 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 BDH1Q02338 343 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 ACSM1Q08AH1 577 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 DOC2BQ14184 412 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 SPHARQ15513 63 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 UBE2V2Q15819 145 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 ZNF826PQ6ZT77 177 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 ZFP41Q8N8Y5 198 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 OR13C3Q8NGS6 347 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 GPR148Q8TDV2 347 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 GHSRQ92847 366 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 RPL3LQ92901 407 aaKnown RBP10.05□□□□□ -0.8
VPS13D-204ENST00000469054 PGLYRP3Q96LB9 341 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 OR5M11Q96RB7 305 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 YTHDF1Q9BYJ9 559 aaKnown RBP10.05□□□□□ -0.8
VPS13D-204ENST00000469054 OR51I2Q9H344 312 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 NARFLQ9H6Q4 476 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 C1orf123Q9NWV4 160 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 SLC7A11Q9UPY5 501 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 DHDHQ9UQ10 334 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 LSM2Q9Y333 95 aaKnown RBP10.05□□□□□ -0.8
VPS13D-204ENST00000469054 PPIAL4AQ9Y536 164 aa10.05□□□□□ -0.8
VPS13D-204ENST00000469054 hCG_1807616A0A1W2PRN6 198 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 ISPDA4D126 451 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 PLPP2O43688 288 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 ZNF205O95201 554 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 FSTL3O95633 263 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 LHBP01229 141 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 CD1AP06126 327 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 CELP19835 753 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 CFHR2P36980 270 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 MDH2P40926 338 aaKnown RBP10.04□□□□□ -0.8
VPS13D-204ENST00000469054 GABARAPL2P60520 117 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 ZMYND11Q15326 602 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 MED22Q15528 200 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 TMEM249Q2WGJ8 235 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 TMEM155Q4W5P6 130 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 YIF1BQ5BJH7 314 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 FAM201AQ5SY85 155 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 WDR82Q6UXN9 313 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 UTS2BQ765I0 119 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 BIVMQ86UB2 503 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 LRRC28Q86X40 367 aaPredicted RBP10.04□□□□□ -0.8
VPS13D-204ENST00000469054 GCSAMQ8N6F7 178 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 SCCPDHQ8NBX0 429 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 CLDND2Q8NHS1 167 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 TSEN15Q8WW01 171 aaKnown RBP10.04□□□□□ -0.8
VPS13D-204ENST00000469054 RGP1Q92546 391 aaPredicted RBP10.04□□□□□ -0.8
VPS13D-204ENST00000469054 TECTBQ96PL2 329 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 METTL17Q9H7H0 456 aaPredicted RBP10.04□□□□□ -0.8
VPS13D-204ENST00000469054 LRRC42Q9Y546 428 aa10.04□□□□□ -0.8
VPS13D-204ENST00000469054 IGKV1-9A0A0C4DH69 117 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 PNMA8CA0A1B0GUJ8 204 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 PQLC2LA1A4F0 135 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 MRPS14O60783 128 aaKnown RBP10.03□□□□□ -0.8
VPS13D-204ENST00000469054 OCM2P0CE71 109 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 ATF1P18846 271 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 IL2RGP31785 369 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 MAP2K4P45985 399 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 HAAOP46952 286 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 SOX2P48431 317 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 FUT6P51993 359 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 LMO4P61968 165 aa10.03□□□□□ -0.8
VPS13D-204ENST00000469054 HOXA4Q00056 320 aaPredicted RBP10.03□□□□□ -0.8
VPS13D-204ENST00000469054 CNN3Q15417 329 aaKnown RBP10.03□□□□□ -0.8
VPS13D-204ENST00000469054 HAGHLQ6PII5 290 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms