RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 FAM78AQ5JUQ0 283 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 AVPI1Q5T686 147 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 Q5W150 140 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 TTC19Q6DKK2 380 aaPredicted RBP3.05□□□□□ -1.92
LSM5-209ENST00000468872 OR11H7Q8NGC8 314 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 UBALD1Q8TB05 177 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 CA5BP1Q8WTZ4 195 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 RGP1Q92546 391 aaPredicted RBP3.05□□□□□ -1.92
LSM5-209ENST00000468872 DYNLL2Q96FJ2 89 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 FANCEQ9HB96 536 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 WFDC1Q9HC57 220 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 ZNRD1Q9P1U0 126 aa3.05□□□□□ -1.92
LSM5-209ENST00000468872 PEF1Q9UBV8 284 aaKnown RBP3.05□□□□□ -1.92
LSM5-209ENST00000468872 YTHDF2Q9Y5A9 579 aaKnown RBP3.05□□□□□ -1.92
LSM5-209ENST00000468872 CHD9Q3L8U1 2897 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 RAB3GAP2Q9H2M9 1393 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 A0A0J9YXV3 536 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 TMEM120BA0PK00 339 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 DNASE2O00115 360 aaPredicted RBP3.04□□□□□ -1.92
LSM5-209ENST00000468872 ERI3O43414 337 aaKnown RBP3.04□□□□□ -1.92
LSM5-209ENST00000468872 IGKV3-11P04433 115 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 PGA4P0DJD7 388 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 PGA3P0DJD8 388 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 PGA5P0DJD9 388 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 SLC11A1P49279 550 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 LINC00483Q53H64 154 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 WDR86Q86TI4 376 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 ZNF547Q8IVP9 402 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 VKORC1L1Q8N0U8 176 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 ZNF321PQ8N8H1 164 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 OR5AR1Q8NGP9 310 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 OR8U1Q8NH10 309 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 COQ8AQ8NI60 647 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 PTX4Q96A99 478 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 APH1AQ96BI3 265 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 DCPSQ96C86 337 aaKnown RBP3.04□□□□□ -1.92
LSM5-209ENST00000468872 NEURL3Q96EH8 262 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 C9orf72Q96LT7 481 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 CAMK2N2Q96S95 79 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 UQCC2Q9BRT2 126 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 BLZF1Q9H2G9 400 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 SLC17A7Q9P2U7 560 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 FREM2Q5SZK8 3169 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 JMJD1CQ15652 2540 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 COL12A1Q99715 3063 aa3.04□□□□□ -1.92
LSM5-209ENST00000468872 FRYLO94915 3013 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 TAF1LQ8IZX4 1826 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 PCDH11XQ9BZA7 1347 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 TMEM223A0PJW6 202 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 ZNF705GA8MUZ8 300 aaPredicted RBP3.03□□□□□ -1.92
LSM5-209ENST00000468872 ZNF99A8MXY4 864 aaPredicted RBP3.03□□□□□ -1.92
LSM5-209ENST00000468872 RSPH10B2B2RC85 870 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 PLPP1O14494 284 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 RAD51BO15315 384 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 ZNF207O43670 478 aaKnown RBP3.03□□□□□ -1.92
LSM5-209ENST00000468872 NMT2O60551 498 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 YIF1AO95070 293 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 RSPH10BP0C881 870 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 GABRG2P18507 467 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 KIR3DL2P43630 455 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 ETV1P50549 477 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 FABP6P51161 128 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 DAOAP59103 153 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 SMUG1Q53HV7 270 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 FAM71E1Q6IPT2 247 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 ADNP2Q6IQ32 1131 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 NANOGP8Q6NSW7 305 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 NKAIN4Q8IVV8 208 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 CMTM8Q8IZV2 173 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 PDCL2Q8N4E4 241 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 INO80EQ8NBZ0 244 aaPredicted RBP3.03□□□□□ -1.92
LSM5-209ENST00000468872 GPR26Q8NDV2 337 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 ZNF382Q96SR6 550 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 SLIRPQ9GZT3 109 aaKnown RBP3.03□□□□□ -1.92
LSM5-209ENST00000468872 OR2AG1Q9H205 316 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 CLSTN2Q9H4D0 955 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 CYP3A43Q9HB55 503 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 MED4Q9NPJ6 270 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 PRSS16Q9NQE7 514 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 TMEM14AQ9Y6G1 99 aa3.03□□□□□ -1.92
LSM5-209ENST00000468872 WDFY3Q8IZQ1 3526 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 CCNB3Q8WWL7 1395 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 LAMA5O15230 3695 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 IGHV1OR15-9A0A0B4J2B8 117 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 SYCE1LA8MT33 242 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 PDZK1P1A8MUH7 402 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 B4GALT5O43286 388 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 CDC40O60508 579 aaKnown RBP eCLIP3.02□□□□□ -1.93
LSM5-209ENST00000468872 REM1O75628 298 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 SEMA3DO95025 777 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 TDP2O95551 362 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 ADRA2AP08913 450 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 TACSTD2P09758 323 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 RHOXF2BP0C7M4 288 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 CISD3P0C7P0 127 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 RBM34P42696 430 aaKnown RBP3.02□□□□□ -1.93
LSM5-209ENST00000468872 GPR1P46091 355 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 LINC00315P59091 139 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 ZNF33AQ06730 810 aa3.02□□□□□ -1.93
LSM5-209ENST00000468872 TCEAL5Q5H9L2 206 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms