RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 EIF4EP06730 217 aaKnown RBP7.16□□□□□ -1.26
BRCA1-208ENST00000468300 SNRPBP14678 240 aaKnown RBP7.16□□□□□ -1.26
BRCA1-208ENST00000468300 ELK1P19419 428 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 TIMP3P35625 211 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 DDOSTP39656 456 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 EVX1P49640 407 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF846Q147U1 533 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 GABRA6Q16445 453 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 UTS2BQ765I0 119 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 PAQR4Q8N4S7 273 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF283Q8N7M2 679 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 OR13C3Q8NGS6 347 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 LRRC20Q8TCA0 184 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 S100ZQ8WXG8 99 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 FGGYQ96C11 551 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 C1QTNF5Q9BXJ0 243 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 PPP1R3EQ9H7J1 279 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 COMMD3Q9UBI1 195 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 IGKV1-9A0A0C4DH69 117 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 GLI4P10075 376 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 ABOP16442 354 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 MECP2P51608 486 aaKnown RBP7.16□□□□□ -1.26
BRCA1-208ENST00000468300 TAF13Q15543 124 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 SWI5Q1ZZU3 235 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF610Q8N9Z0 462 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 WDR31Q8NA23 367 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 TSEN15Q8WW01 171 aaKnown RBP7.16□□□□□ -1.26
BRCA1-208ENST00000468300 BORCS5Q969J3 196 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 KCTD12Q96CX2 325 aaKnown RBP7.16□□□□□ -1.26
BRCA1-208ENST00000468300 SLC25A38Q96DW6 304 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 POM121L2Q96KW2 1035 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 TP63Q9H3D4 680 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-208ENST00000468300 V9GY05 133 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 RTTNQ86VV8 2226 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 TRBV23-1A0A0A0MS06 115 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 CCL2P13500 99 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF14P17017 642 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-208ENST00000468300 ACKR3P25106 362 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 GCH1P30793 250 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 PCBD1P61457 104 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 GLYATL3Q5SZD4 288 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 DRAM2Q6UX65 266 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 OR5AS1Q8N127 324 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 OR4D10Q8NGI6 311 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 FBXW5Q969U6 566 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 EAF1Q96JC9 268 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-208ENST00000468300 PAPOLGQ9BWT3 736 aaKnown RBP7.16□□□□□ -1.26
BRCA1-208ENST00000468300 SRRQ9GZT4 340 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 RANBP3Q9H6Z4 567 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-208ENST00000468300 HMG20AQ9NP66 347 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 OR5V1Q9UGF6 321 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 SHANK1Q9Y566 2161 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 SYT7O43581 403 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 SCO1O75880 301 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 ANXA2P07355 339 aaKnown RBP7.15□□□□□ -1.26
BRCA1-208ENST00000468300 CELA3BP08861 270 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 GABRA1P14867 456 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 HTR5AP47898 357 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 CLDN12P56749 244 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 UBE2G2P60604 165 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 ECH1Q13011 328 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 P2RY14Q15391 338 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 OR2A2Q6IF42 318 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF474Q6S9Z5 364 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-208ENST00000468300 ETV3LQ6ZN32 361 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 ABHD12BQ7Z5M8 362 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-208ENST00000468300 CNEP1R1Q8N9A8 125 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 OR2AE1Q8NHA4 323 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 ACOT12Q8WYK0 555 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 AP3S1Q92572 193 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 SPSB4Q96A44 273 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 MS4A3Q96HJ5 214 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 POFUT1Q9H488 388 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 TCF7L1Q9HCS4 588 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 CYSLTR2Q9NS75 346 aa7.15□□□□□ -1.26
BRCA1-208ENST00000468300 INTS1Q8N201 2190 aaKnown RBP7.15□□□□□ -1.26
BRCA1-208ENST00000468300 LYZL6O75951 148 aa7.15□□□□□ -1.27
BRCA1-208ENST00000468300 RAB4AP20338 218 aa7.15□□□□□ -1.27
BRCA1-208ENST00000468300 PRSS12P56730 875 aa7.15□□□□□ -1.27
BRCA1-208ENST00000468300 RAB1AP62820 205 aa7.15□□□□□ -1.27
BRCA1-208ENST00000468300 PPP3R1P63098 170 aa7.15□□□□□ -1.27
BRCA1-208ENST00000468300 RGS21Q2M5E4 152 aa7.15□□□□□ -1.27
BRCA1-208ENST00000468300 SLC36A2Q495M3 483 aa7.15□□□□□ -1.27
BRCA1-208ENST00000468300 MDP1Q86V88 176 aa7.15□□□□□ -1.27
BRCA1-208ENST00000468300 TRMT10AQ8TBZ6 339 aaKnown RBP7.15□□□□□ -1.27
BRCA1-208ENST00000468300 SPTSSAQ969W0 71 aa7.15□□□□□ -1.27
BRCA1-208ENST00000468300 CITED2Q99967 270 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-208ENST00000468300 KCNK15Q9H427 330 aa7.15□□□□□ -1.27
BRCA1-208ENST00000468300 MOV10Q9HCE1 1003 aaKnown RBP7.15□□□□□ -1.27
BRCA1-208ENST00000468300 CRIM1Q9NZV1 1036 aa7.15□□□□□ -1.27
BRCA1-208ENST00000468300 ATP23Q9Y6H3 246 aa7.15□□□□□ -1.27
BRCA1-208ENST00000468300 RGS5O15539 181 aa7.14□□□□□ -1.27
BRCA1-208ENST00000468300 FARS2O95363 451 aaKnown RBP7.14□□□□□ -1.27
BRCA1-208ENST00000468300 CSTBP04080 98 aaKnown RBP7.14□□□□□ -1.27
BRCA1-208ENST00000468300 PTGER4P35408 488 aa7.14□□□□□ -1.27
BRCA1-208ENST00000468300 ZNF92Q03936 586 aa7.14□□□□□ -1.27
BRCA1-208ENST00000468300 BAK1Q16611 211 aa7.14□□□□□ -1.27
BRCA1-208ENST00000468300 DDI2Q5TDH0 399 aa7.14□□□□□ -1.27
BRCA1-208ENST00000468300 CNIH2Q6PI25 160 aa7.14□□□□□ -1.27
BRCA1-208ENST00000468300 DOK3Q7L591 496 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms