RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TNFRSF14Q92956 283 aa20.09■□□□□ 0.81
PTCH1-210ENST00000468211 RNF114Q9Y508 228 aa20.09■□□□□ 0.81
PTCH1-210ENST00000468211 AQP12BA6NM10 295 aa20.08■□□□□ 0.81
PTCH1-210ENST00000468211 PRR32B1ATL7 298 aa20.08■□□□□ 0.81
PTCH1-210ENST00000468211 PSMD9O00233 223 aa20.08■□□□□ 0.81
PTCH1-210ENST00000468211 GPR37O15354 613 aa20.08■□□□□ 0.81
PTCH1-210ENST00000468211 RHBDL1O75783 438 aa20.08■□□□□ 0.81
PTCH1-210ENST00000468211 HMGN1P05114 100 aa20.08■□□□□ 0.81
PTCH1-210ENST00000468211 GPM6AP51674 278 aa20.08■□□□□ 0.81
PTCH1-210ENST00000468211 RPL15P61313 204 aaKnown RBP20.08■□□□□ 0.81
PTCH1-210ENST00000468211 AQP12AQ8IXF9 295 aa20.08■□□□□ 0.81
PTCH1-210ENST00000468211 DMRTB1Q96MA1 342 aa20.08■□□□□ 0.81
PTCH1-210ENST00000468211 DNTTIP1Q9H147 329 aa20.08■□□□□ 0.81
PTCH1-210ENST00000468211 C1orf21Q9H246 121 aa20.08■□□□□ 0.81
PTCH1-210ENST00000468211 RPS7P62081 194 aaKnown RBP20.07■□□□□ 0.8
PTCH1-210ENST00000468211 KRT77Q7Z794 578 aa20.07■□□□□ 0.8
PTCH1-210ENST00000468211 ZDHHC23Q8IYP9 409 aa20.07■□□□□ 0.8
PTCH1-210ENST00000468211 CMTM4Q8IZR5 234 aa20.07■□□□□ 0.8
PTCH1-210ENST00000468211 ELL3Q9HB65 397 aaPredicted RBP20.07■□□□□ 0.8
PTCH1-210ENST00000468211 ZNRD1Q9P1U0 126 aa20.07■□□□□ 0.8
PTCH1-210ENST00000468211 FAM96BQ9Y3D0 163 aa20.07■□□□□ 0.8
PTCH1-210ENST00000468211 E2F6O75461 281 aa20.06■□□□□ 0.8
PTCH1-210ENST00000468211 PROK1P58294 105 aa20.06■□□□□ 0.8
PTCH1-210ENST00000468211 APOFQ13790 326 aa20.06■□□□□ 0.8
PTCH1-210ENST00000468211 SLC35D3Q5M8T2 416 aa20.06■□□□□ 0.8
PTCH1-210ENST00000468211 Q6ZSV7 163 aa20.06■□□□□ 0.8
PTCH1-210ENST00000468211 NIPAL2Q9H841 368 aa20.06■□□□□ 0.8
PTCH1-210ENST00000468211 ZNF556Q9HAH1 456 aa20.06■□□□□ 0.8
PTCH1-210ENST00000468211 SLC25A19Q9HC21 320 aa20.06■□□□□ 0.8
PTCH1-210ENST00000468211 ABCB9Q9NP78 766 aa20.06■□□□□ 0.8
PTCH1-210ENST00000468211 FAM206AQ9NX38 181 aa20.06■□□□□ 0.8
PTCH1-210ENST00000468211 NLKQ9UBE8 527 aa20.06■□□□□ 0.8
PTCH1-210ENST00000468211 SLC25A10Q9UBX3 287 aaPredicted RBP20.06■□□□□ 0.8
PTCH1-210ENST00000468211 LAMP5Q9UJQ1 280 aa20.06■□□□□ 0.8
PTCH1-210ENST00000468211 IGKV1D-17A0A075B6S4 117 aa20.05■□□□□ 0.8
PTCH1-210ENST00000468211 CCDC182A6NF36 153 aa20.05■□□□□ 0.8
PTCH1-210ENST00000468211 NKX6-3A6NJ46 265 aa20.05■□□□□ 0.8
PTCH1-210ENST00000468211 OR2AT4A6NND4 320 aa20.05■□□□□ 0.8
PTCH1-210ENST00000468211 NPFFO15130 113 aa20.05■□□□□ 0.8
PTCH1-210ENST00000468211 SIGLEC5O15389 551 aa20.05■□□□□ 0.8
PTCH1-210ENST00000468211 MRPL3P09001 348 aaKnown RBP20.05■□□□□ 0.8
PTCH1-210ENST00000468211 ACAA1P09110 424 aaPredicted RBP20.05■□□□□ 0.8
PTCH1-210ENST00000468211 FBP1P09467 338 aa20.05■□□□□ 0.8
PTCH1-210ENST00000468211 PDLIM3Q53GG5 364 aaPredicted RBP20.05■□□□□ 0.8
PTCH1-210ENST00000468211 CEP78Q5JTW2 689 aa20.05■□□□□ 0.8
PTCH1-210ENST00000468211 ASPHD2Q6ICH7 369 aa20.05■□□□□ 0.8
PTCH1-210ENST00000468211 KRT74Q7RTS7 529 aa20.05■□□□□ 0.8
PTCH1-210ENST00000468211 TRPM8Q7Z2W7 1104 aa20.05■□□□□ 0.8
PTCH1-210ENST00000468211 ZSCAN4Q8NAM6 433 aaPredicted RBP20.05■□□□□ 0.8
PTCH1-210ENST00000468211 PPP1R14AQ96A00 147 aa20.05■□□□□ 0.8
PTCH1-210ENST00000468211 TTTY10Q9BZA0 68 aa20.05■□□□□ 0.8
PTCH1-210ENST00000468211 OR51I2Q9H344 312 aa20.05■□□□□ 0.8
PTCH1-210ENST00000468211 DPAGT1Q9H3H5 408 aa20.05■□□□□ 0.8
PTCH1-210ENST00000468211 ZNF816-ZNF321PA0A0X1KG74 233 aa20.04■□□□□ 0.8
PTCH1-210ENST00000468211 ZNF732B4DXR9 585 aa20.04■□□□□ 0.8
PTCH1-210ENST00000468211 CLPXO76031 633 aa20.04■□□□□ 0.8
PTCH1-210ENST00000468211 NDUFB7P17568 137 aa20.04■□□□□ 0.8
PTCH1-210ENST00000468211 OCLNQ16625 522 aa20.04■□□□□ 0.8
PTCH1-210ENST00000468211 MIDNQ504T8 468 aa20.04■□□□□ 0.8
PTCH1-210ENST00000468211 NPRL2Q8WTW4 380 aa20.04■□□□□ 0.8
PTCH1-210ENST00000468211 MED30Q96HR3 178 aa20.04■□□□□ 0.8
PTCH1-210ENST00000468211 TEAD3Q99594 435 aa20.04■□□□□ 0.8
PTCH1-210ENST00000468211 YIPF3Q9GZM5 350 aa20.04■□□□□ 0.8
PTCH1-210ENST00000468211 ZNF222Q9UK12 451 aa20.04■□□□□ 0.8
PTCH1-210ENST00000468211 COPS3Q9UNS2 423 aa20.04■□□□□ 0.8
PTCH1-210ENST00000468211 MAB21L2Q9Y586 359 aa20.04■□□□□ 0.8
PTCH1-210ENST00000468211 A0A0U1RQV5 110 aa20.03■□□□□ 0.8
PTCH1-210ENST00000468211 PSG2P11465 335 aa20.03■□□□□ 0.8
PTCH1-210ENST00000468211 ANXA8P13928 327 aa20.03■□□□□ 0.8
PTCH1-210ENST00000468211 GLRA1P23415 457 aa20.03■□□□□ 0.8
PTCH1-210ENST00000468211 SAA4P35542 130 aa20.03■□□□□ 0.8
PTCH1-210ENST00000468211 MAP2K3P46734 347 aa20.03■□□□□ 0.8
PTCH1-210ENST00000468211 GABRA2P47869 451 aa20.03■□□□□ 0.8
PTCH1-210ENST00000468211 CBX1P83916 185 aa20.03■□□□□ 0.8
PTCH1-210ENST00000468211 GUCA2AQ02747 115 aa20.03■□□□□ 0.8
PTCH1-210ENST00000468211 GDPGP1Q6ZNW5 385 aa20.03■□□□□ 0.8
PTCH1-210ENST00000468211 SPATA24Q86W54 205 aa20.03■□□□□ 0.8
PTCH1-210ENST00000468211 ZNRF1Q8ND25 227 aa20.03■□□□□ 0.8
PTCH1-210ENST00000468211 FAM81AQ8TBF8 368 aa20.03■□□□□ 0.8
PTCH1-210ENST00000468211 HIST1H2AAQ96QV6 131 aa20.03■□□□□ 0.8
PTCH1-210ENST00000468211 TVP23BQ9NYZ1 205 aa20.03■□□□□ 0.8
PTCH1-210ENST00000468211 TMEM269A0A1B0GVZ9 245 aa20.02■□□□□ 0.8
PTCH1-210ENST00000468211 FKBP6O75344 327 aa20.02■□□□□ 0.8
PTCH1-210ENST00000468211 IGLV3-1P01715 115 aa20.02■□□□□ 0.8
PTCH1-210ENST00000468211 EEF1B2P24534 225 aaKnown RBP20.02■□□□□ 0.8
PTCH1-210ENST00000468211 CAV3P56539 151 aa20.02■□□□□ 0.8
PTCH1-210ENST00000468211 GNG3P63215 75 aa20.02■□□□□ 0.8
PTCH1-210ENST00000468211 SNAPC1Q16533 368 aa20.02■□□□□ 0.8
PTCH1-210ENST00000468211 CEACAM21Q3KPI0 293 aa20.02■□□□□ 0.8
PTCH1-210ENST00000468211 HCP5Q6MZN7 132 aa20.02■□□□□ 0.8
PTCH1-210ENST00000468211 OR51E1Q8TCB6 317 aa20.02■□□□□ 0.8
PTCH1-210ENST00000468211 DUS3LQ96G46 650 aaKnown RBP20.02■□□□□ 0.8
PTCH1-210ENST00000468211 PBOV1Q9GZY1 135 aa20.02■□□□□ 0.8
PTCH1-210ENST00000468211 GPR84Q9NQS5 396 aa20.02■□□□□ 0.8
PTCH1-210ENST00000468211 DNAJB9Q9UBS3 223 aa20.02■□□□□ 0.8
PTCH1-210ENST00000468211 VPREB3Q9UKI3 123 aa20.02■□□□□ 0.8
PTCH1-210ENST00000468211 CAB39Q9Y376 341 aaPredicted RBP20.02■□□□□ 0.8
PTCH1-210ENST00000468211 MEIOCA2RUB1 952 aa20.01■□□□□ 0.79
PTCH1-210ENST00000468211 FAHP16930 419 aa20.01■□□□□ 0.79
PTCH1-210ENST00000468211 MFGE8Q08431 387 aaPredicted RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms