RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 HS3ST5Q8IZT8 346 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 BBS1Q8NFJ9 593 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 ZNF671Q8TAW3 534 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 DNAJC9Q8WXX5 260 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 DNTTIP1Q9H147 329 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 PRDM13Q9H4Q3 707 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 DUX4Q9UBX2 424 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 MMP24Q9Y5R2 645 aa14.46□□□□□ -0.09
COL7A1-206ENST00000466591 CLPSL1A2RUU4 121 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 ZNF732B4DXR9 585 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 GPR137BO60478 399 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 FKBP6O75344 327 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 IGHV4-59P01825 116 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 RIDAP52758 137 aaKnown RBP14.45□□□□□ -0.1
COL7A1-206ENST00000466591 ACTR3P61158 418 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 RPL15P61313 204 aaKnown RBP14.45□□□□□ -0.1
COL7A1-206ENST00000466591 ESRRGP62508 458 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 GNG3P63215 75 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 ELF3P78545 371 aaPredicted RBP14.45□□□□□ -0.1
COL7A1-206ENST00000466591 CDK5Q00535 292 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 RIPPLY1Q0D2K3 151 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 STUMQ69YW2 141 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 DHRS7BQ6IAN0 325 aaPredicted RBP14.45□□□□□ -0.1
COL7A1-206ENST00000466591 MOB3CQ70IA8 216 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 TRPM8Q7Z2W7 1104 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 FGFRL1Q8N441 504 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 TMEM185AQ8NFB2 350 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 RAB3IPQ96QF0 476 aaPredicted RBP14.45□□□□□ -0.1
COL7A1-206ENST00000466591 CNN2Q99439 309 aaKnown RBP14.45□□□□□ -0.1
COL7A1-206ENST00000466591 TTTY10Q9BZA0 68 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 YIPF3Q9GZM5 350 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 TLNRD1Q9H1K6 362 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 WDR13Q9H1Z4 485 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 C1RLQ9NZP8 487 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 NLKQ9UBE8 527 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 KLHDC2Q9Y2U9 406 aa14.45□□□□□ -0.1
COL7A1-206ENST00000466591 H0YAE9 185 aa14.44□□□□□ -0.1
COL7A1-206ENST00000466591 M0QZ24 198 aa14.44□□□□□ -0.1
COL7A1-206ENST00000466591 TIMM23O14925 209 aa14.44□□□□□ -0.1
COL7A1-206ENST00000466591 MTRF1O75570 445 aaKnown RBP14.44□□□□□ -0.1
COL7A1-206ENST00000466591 NDUFA7O95182 113 aa14.44□□□□□ -0.1
COL7A1-206ENST00000466591 ACKR3P25106 362 aa14.44□□□□□ -0.1
COL7A1-206ENST00000466591 HCCSP53701 268 aa14.44□□□□□ -0.1
COL7A1-206ENST00000466591 NCR3LG1Q68D85 454 aa14.44□□□□□ -0.1
COL7A1-206ENST00000466591 FAM185AQ8N0U4 392 aa14.44□□□□□ -0.1
COL7A1-206ENST00000466591 NPRL2Q8WTW4 380 aa14.44□□□□□ -0.1
COL7A1-206ENST00000466591 WFDC12Q8WWY7 111 aa14.44□□□□□ -0.1
COL7A1-206ENST00000466591 ASB17Q8WXJ9 295 aa14.44□□□□□ -0.1
COL7A1-206ENST00000466591 UBE2FQ969M7 185 aa14.44□□□□□ -0.1
COL7A1-206ENST00000466591 DCTN5Q9BTE1 182 aa14.44□□□□□ -0.1
COL7A1-206ENST00000466591 SLC25A19Q9HC21 320 aa14.44□□□□□ -0.1
COL7A1-206ENST00000466591 ENPP5Q9UJA9 477 aa14.44□□□□□ -0.1
COL7A1-206ENST00000466591 RNF114Q9Y508 228 aa14.44□□□□□ -0.1
COL7A1-206ENST00000466591 MEIOCA2RUB1 952 aa14.43□□□□□ -0.1
COL7A1-206ENST00000466591 ANKRD61A6NGH8 418 aa14.43□□□□□ -0.1
COL7A1-206ENST00000466591 ACOD1A6NK06 481 aa14.43□□□□□ -0.1
COL7A1-206ENST00000466591 OR5B21A6NL26 309 aa14.43□□□□□ -0.1
COL7A1-206ENST00000466591 OR2AT4A6NND4 320 aa14.43□□□□□ -0.1
COL7A1-206ENST00000466591 WIPF1O43516 503 aa14.43□□□□□ -0.1
COL7A1-206ENST00000466591 ALOX5APP20292 161 aa14.43□□□□□ -0.1
COL7A1-206ENST00000466591 PRB3Q04118 309 aaPredicted RBP14.43□□□□□ -0.1
COL7A1-206ENST00000466591 ZNF684Q5T5D7 378 aa14.43□□□□□ -0.1
COL7A1-206ENST00000466591 BCAS4Q8TDM0 211 aa14.43□□□□□ -0.1
COL7A1-206ENST00000466591 LYZL4Q96KX0 146 aa14.43□□□□□ -0.1
COL7A1-206ENST00000466591 DMRTB1Q96MA1 342 aa14.43□□□□□ -0.1
COL7A1-206ENST00000466591 PBOV1Q9GZY1 135 aa14.43□□□□□ -0.1
COL7A1-206ENST00000466591 GPR84Q9NQS5 396 aa14.43□□□□□ -0.1
COL7A1-206ENST00000466591 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.43□□□□□ -0.1
COL7A1-206ENST00000466591 PIGLQ9Y2B2 252 aa14.43□□□□□ -0.1
COL7A1-206ENST00000466591 A0A0U1RQV5 110 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 A0A1W2PPH5 198 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 LOC110117498-PIK3R3F6TDL0 507 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.42□□□□□ -0.1
COL7A1-206ENST00000466591 NPFFO15130 113 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 ZNF254O75437 659 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 DNAJC8O75937 253 aaPredicted RBP14.42□□□□□ -0.1
COL7A1-206ENST00000466591 SELLP14151 372 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 ATP6V1B1P15313 513 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 IER3P46695 156 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 CRISP1P54107 249 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 CEACAM21Q3KPI0 293 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 BCL2L15Q5TBC7 163 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 ATPAF1Q5TC12 328 aaPredicted RBP14.42□□□□□ -0.1
COL7A1-206ENST00000466591 HAGHLQ6PII5 290 aaPredicted RBP14.42□□□□□ -0.1
COL7A1-206ENST00000466591 DEGS2Q6QHC5 323 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 LDLRAD3Q86YD5 345 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 ZNF679Q8IYX0 411 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 OR51E1Q8TCB6 317 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 HPSE2Q8WWQ2 592 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 TEAD3Q99594 435 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 METTL8Q9H825 291 aaKnown RBP14.42□□□□□ -0.1
COL7A1-206ENST00000466591 KRT84Q9NSB2 600 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 POMPQ9Y244 141 aa14.42□□□□□ -0.1
COL7A1-206ENST00000466591 TGM4P49221 684 aa14.41□□□□□ -0.1
COL7A1-206ENST00000466591 KLRD1Q13241 179 aa14.41□□□□□ -0.1
COL7A1-206ENST00000466591 DGUOKQ16854 277 aa14.41□□□□□ -0.1
COL7A1-206ENST00000466591 SMIM21Q3B7S5 101 aa14.41□□□□□ -0.1
COL7A1-206ENST00000466591 ZNF788Q6ZQV5 615 aa14.41□□□□□ -0.1
COL7A1-206ENST00000466591 PIP4P2Q8N4L2 257 aa14.41□□□□□ -0.1
COL7A1-206ENST00000466591 LY6G5BQ8NDX9 201 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms