RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 COMPP49747 757 aaPredicted RBP18.02■□□□□ 0.48
LIME1-203ENST00000465591 GPM6AP51674 278 aa18.02■□□□□ 0.48
LIME1-203ENST00000465591 ZNF829Q3KNS6 432 aaPredicted RBP18.02■□□□□ 0.48
LIME1-203ENST00000465591 CD276Q5ZPR3 534 aa18.02■□□□□ 0.48
LIME1-203ENST00000465591 STUMQ69YW2 141 aa18.02■□□□□ 0.48
LIME1-203ENST00000465591 KCTD8Q6ZWB6 473 aa18.02■□□□□ 0.48
LIME1-203ENST00000465591 BTN2A1Q7KYR7 527 aa18.02■□□□□ 0.48
LIME1-203ENST00000465591 GID4Q8IVV7 300 aa18.02■□□□□ 0.48
LIME1-203ENST00000465591 TBX5Q99593 518 aa18.02■□□□□ 0.48
LIME1-203ENST00000465591 PCGF1Q9BSM1 259 aa18.02■□□□□ 0.48
LIME1-203ENST00000465591 ABCB9Q9NP78 766 aa18.02■□□□□ 0.48
LIME1-203ENST00000465591 SNTG1Q9NSN8 517 aa18.02■□□□□ 0.48
LIME1-203ENST00000465591 ZNF879B4DU55 563 aa18.01■□□□□ 0.47
LIME1-203ENST00000465591 HAX1O00165 279 aa18.01■□□□□ 0.47
LIME1-203ENST00000465591 AKR7A2O43488 359 aa18.01■□□□□ 0.47
LIME1-203ENST00000465591 RHBDL1O75783 438 aa18.01■□□□□ 0.47
LIME1-203ENST00000465591 FAHP16930 419 aa18.01■□□□□ 0.47
LIME1-203ENST00000465591 RUSC1-AS1Q66K80 236 aa18.01■□□□□ 0.47
LIME1-203ENST00000465591 RBMS3Q6XE24 437 aaKnown RBP18.01■□□□□ 0.47
LIME1-203ENST00000465591 COMMD2Q86X83 199 aa18.01■□□□□ 0.47
LIME1-203ENST00000465591 OR10Z1Q8NGY1 313 aa18.01■□□□□ 0.47
LIME1-203ENST00000465591 ST8SIA4Q92187 359 aa18.01■□□□□ 0.47
LIME1-203ENST00000465591 GCDHQ92947 438 aaPredicted RBP18.01■□□□□ 0.47
LIME1-203ENST00000465591 ENOPH1Q9UHY7 261 aa18.01■□□□□ 0.47
LIME1-203ENST00000465591 ERICH4A6NGS2 130 aa18■□□□□ 0.47
LIME1-203ENST00000465591 ZNF732B4DXR9 585 aa18■□□□□ 0.47
LIME1-203ENST00000465591 ZNF670-ZNF695F2Z2N8 137 aa18■□□□□ 0.47
LIME1-203ENST00000465591 LOC110117498-PIK3R3F6TDL0 507 aa18■□□□□ 0.47
LIME1-203ENST00000465591 PRTN3P24158 256 aa18■□□□□ 0.47
LIME1-203ENST00000465591 CFPP27918 469 aa18■□□□□ 0.47
LIME1-203ENST00000465591 BAMBIQ13145 260 aa18■□□□□ 0.47
LIME1-203ENST00000465591 UBE2FQ969M7 185 aa18■□□□□ 0.47
LIME1-203ENST00000465591 MNTQ99583 582 aa18■□□□□ 0.47
LIME1-203ENST00000465591 SIRPDQ9H106 197 aa18■□□□□ 0.47
LIME1-203ENST00000465591 OR51I2Q9H344 312 aa18■□□□□ 0.47
LIME1-203ENST00000465591 WARS2Q9UGM6 360 aaKnown RBP18■□□□□ 0.47
LIME1-203ENST00000465591 GTF2A1LQ9UNN4 478 aa18■□□□□ 0.47
LIME1-203ENST00000465591 PIGLQ9Y2B2 252 aa18■□□□□ 0.47
LIME1-203ENST00000465591 R4GMQ9 66 aa18■□□□□ 0.47
LIME1-203ENST00000465591 A0A1B0GTI1 187 aa17.99■□□□□ 0.47
LIME1-203ENST00000465591 ATP6V1B1P15313 513 aa17.99■□□□□ 0.47
LIME1-203ENST00000465591 HTR1FP30939 366 aa17.99■□□□□ 0.47
LIME1-203ENST00000465591 TGM4P49221 684 aa17.99■□□□□ 0.47
LIME1-203ENST00000465591 RIPPLY1Q0D2K3 151 aa17.99■□□□□ 0.47
LIME1-203ENST00000465591 CEACAM21Q3KPI0 293 aa17.99■□□□□ 0.47
LIME1-203ENST00000465591 MOB3CQ70IA8 216 aa17.99■□□□□ 0.47
LIME1-203ENST00000465591 ELMOD2Q8IZ81 293 aa17.99■□□□□ 0.47
LIME1-203ENST00000465591 EME1Q96AY2 570 aa17.99■□□□□ 0.47
LIME1-203ENST00000465591 C12orf43Q96C57 262 aaKnown RBP17.99■□□□□ 0.47
LIME1-203ENST00000465591 WDFY2Q96P53 400 aa17.99■□□□□ 0.47
LIME1-203ENST00000465591 HIST1H2AAQ96QV6 131 aa17.99■□□□□ 0.47
LIME1-203ENST00000465591 RBM4BQ9BQ04 359 aaKnown RBP17.99■□□□□ 0.47
LIME1-203ENST00000465591 RPUSD1Q9UJJ7 312 aaKnown RBP17.99■□□□□ 0.47
LIME1-203ENST00000465591 OR52A1Q9UKL2 312 aa17.99■□□□□ 0.47
LIME1-203ENST00000465591 SLC22A13Q9Y226 551 aa17.99■□□□□ 0.47
LIME1-203ENST00000465591 NBEAL1Q6ZS30 2694 aa17.99■□□□□ 0.47
LIME1-203ENST00000465591 A0A1W2PQL4 384 aaPredicted RBP17.98■□□□□ 0.47
LIME1-203ENST00000465591 DHRS3O75911 302 aa17.98■□□□□ 0.47
LIME1-203ENST00000465591 TOX4O94842 621 aa17.98■□□□□ 0.47
LIME1-203ENST00000465591 ALPLP05186 524 aa17.98■□□□□ 0.47
LIME1-203ENST00000465591 LIPFP07098 398 aa17.98■□□□□ 0.47
LIME1-203ENST00000465591 ARF6P62330 175 aa17.98■□□□□ 0.47
LIME1-203ENST00000465591 GNG3P63215 75 aa17.98■□□□□ 0.47
LIME1-203ENST00000465591 EGR3Q06889 387 aa17.98■□□□□ 0.47
LIME1-203ENST00000465591 IKZF1Q13422 519 aa17.98■□□□□ 0.47
LIME1-203ENST00000465591 SLC9A3R2Q15599 337 aa17.98■□□□□ 0.47
LIME1-203ENST00000465591 DEFB112Q30KQ8 113 aa17.98■□□□□ 0.47
LIME1-203ENST00000465591 ZNF684Q5T5D7 378 aa17.98■□□□□ 0.47
LIME1-203ENST00000465591 BCL2L15Q5TBC7 163 aa17.98■□□□□ 0.47
LIME1-203ENST00000465591 ATPAF1Q5TC12 328 aaPredicted RBP17.98■□□□□ 0.47
LIME1-203ENST00000465591 THAP5Q7Z6K1 395 aa17.98■□□□□ 0.47
LIME1-203ENST00000465591 PNLDC1Q8NA58 520 aaKnown RBP17.98■□□□□ 0.47
LIME1-203ENST00000465591 OR8J1Q8NGP2 316 aa17.98■□□□□ 0.47
LIME1-203ENST00000465591 TAF15Q92804 592 aaKnown RBP eCLIP17.98■□□□□ 0.47
LIME1-203ENST00000465591 STMN2Q93045 179 aa17.98■□□□□ 0.47
LIME1-203ENST00000465591 DNAJB11Q9UBS4 358 aa17.98■□□□□ 0.47
LIME1-203ENST00000465591 CENPVL3A0A0U1RRI6 287 aa17.97■□□□□ 0.47
LIME1-203ENST00000465591 P2RY10O00398 339 aa17.97■□□□□ 0.47
LIME1-203ENST00000465591 EI24O14681 340 aa17.97■□□□□ 0.47
LIME1-203ENST00000465591 RPP14O95059 124 aaKnown RBP17.97■□□□□ 0.47
LIME1-203ENST00000465591 MTNR1AP48039 350 aa17.97■□□□□ 0.47
LIME1-203ENST00000465591 GPR157Q5UAW9 335 aa17.97■□□□□ 0.47
LIME1-203ENST00000465591 PLCXD3Q63HM9 321 aa17.97■□□□□ 0.47
LIME1-203ENST00000465591 ZNF788Q6ZQV5 615 aa17.97■□□□□ 0.47
LIME1-203ENST00000465591 SLC36A1Q7Z2H8 476 aa17.97■□□□□ 0.47
LIME1-203ENST00000465591 LY6G5BQ8NDX9 201 aa17.97■□□□□ 0.47
LIME1-203ENST00000465591 OR5A2Q8NGI9 324 aa17.97■□□□□ 0.47
LIME1-203ENST00000465591 OR14K1Q8NGZ2 314 aa17.97■□□□□ 0.47
LIME1-203ENST00000465591 ANGPTL6Q8NI99 470 aa17.97■□□□□ 0.47
LIME1-203ENST00000465591 GAFA1Q96PS6 74 aa17.97■□□□□ 0.47
LIME1-203ENST00000465591 MOB1AQ9H8S9 216 aa17.97■□□□□ 0.47
LIME1-203ENST00000465591 ENPP5Q9UJA9 477 aa17.97■□□□□ 0.47
LIME1-203ENST00000465591 V9GYS6 101 aa17.97■□□□□ 0.47
LIME1-203ENST00000465591 A6NIN4 97 aa17.96■□□□□ 0.47
LIME1-203ENST00000465591 E9PQ18 207 aa17.96■□□□□ 0.47
LIME1-203ENST00000465591 ECDO95905 644 aaPredicted RBP17.96■□□□□ 0.47
LIME1-203ENST00000465591 DGUOKQ16854 277 aa17.96■□□□□ 0.47
LIME1-203ENST00000465591 AWAT1Q58HT5 328 aa17.96■□□□□ 0.47
LIME1-203ENST00000465591 ZBTB37Q5TC79 503 aa17.96■□□□□ 0.47
LIME1-203ENST00000465591 METTL11BQ5VVY1 283 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms