RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 TMEM212A6NML5 194 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 FAM157AC9JC47 383 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 F5H0A9 414 aaPredicted RBP17.04■□□□□ 0.32
SKA3-205ENST00000465471 ZFPL1O95159 310 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 CCDC159P0C7I6 412 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 IRF2P14316 349 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 GTF2A1P52655 376 aaPredicted RBP17.04■□□□□ 0.32
SKA3-205ENST00000465471 GNG3P63215 75 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 HOXA4Q00056 320 aaPredicted RBP17.04■□□□□ 0.32
SKA3-205ENST00000465471 MED21Q13503 144 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 CDK5R1Q15078 307 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 ZNF404Q494X3 552 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 FAM201AQ5SY85 155 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 RNLSQ5VYX0 342 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 PLCXD3Q63HM9 321 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 MOB3CQ70IA8 216 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 Q71RC1 249 aaPredicted RBP17.04■□□□□ 0.32
SKA3-205ENST00000465471 SPICQ8N5J4 248 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 OR10AC1Q8NH08 325 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 RAB39BQ96DA2 213 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 HIST1H2AAQ96QV6 131 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 OR51I2Q9H344 312 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 PLEKHA1Q9HB21 404 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 PAK1IP1Q9NWT1 392 aaPredicted RBP17.04■□□□□ 0.32
SKA3-205ENST00000465471 BABAM2Q9NXR7 383 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 HHLA2Q9UM44 414 aa17.04■□□□□ 0.32
SKA3-205ENST00000465471 PPIAL4EA0A075B759 164 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 ANKRD61A6NGH8 418 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 A6NIN4 97 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 PPIAL4DF5H284 164 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 H3BSH0 61 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 LALBAP00709 142 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 CDK1P06493 297 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 PPIAL4FP0DN26 164 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 GPM6AP51674 278 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 SLC35A2P78381 396 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 DMRTC1Q5HYR2 192 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 RPL22L1Q6P5R6 122 aaKnown RBP17.03■□□□□ 0.32
SKA3-205ENST00000465471 STX19Q8N4C7 294 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 ZNF676Q8N7Q3 588 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 LINC01356Q8N9X3 169 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 SCCPDHQ8NBX0 429 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 OR51A4Q8NGJ6 313 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 ZNF184Q99676 751 aaPredicted RBP17.03■□□□□ 0.32
SKA3-205ENST00000465471 PDCD1LG2Q9BQ51 273 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 GPR173Q9NS66 373 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 CHCHD3Q9NX63 227 aaKnown RBP17.03■□□□□ 0.32
SKA3-205ENST00000465471 PPIAL4AQ9Y536 164 aa17.03■□□□□ 0.32
SKA3-205ENST00000465471 SONP18583 2426 aaKnown RBP17.03■□□□□ 0.32
SKA3-205ENST00000465471 PQLC2LA1A4F0 135 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 B4DSR2 109 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 ZNF732B4DXR9 585 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 CDIPTO14735 213 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 OGG1O15527 345 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 ZNF205O95201 554 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 RPSAP08865 295 aaKnown RBP17.02■□□□□ 0.32
SKA3-205ENST00000465471 EGR1P18146 543 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 UBE2V2Q15819 145 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 TEX36Q5VZQ5 186 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 OR10Z1Q8NGY1 313 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 OR5AK2Q8NH90 309 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 PP6455Q8WZ26 134 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 RGP1Q92546 391 aaPredicted RBP17.02■□□□□ 0.32
SKA3-205ENST00000465471 RPL3LQ92901 407 aaKnown RBP17.02■□□□□ 0.32
SKA3-205ENST00000465471 ADAT3Q96EY9 351 aaPredicted RBP17.02■□□□□ 0.32
SKA3-205ENST00000465471 TMEM246Q9BRR3 403 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 CDCA4Q9BXL8 241 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 DUSP21Q9H596 190 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 METTL17Q9H7H0 456 aaPredicted RBP17.02■□□□□ 0.32
SKA3-205ENST00000465471 PATZ1Q9HBE1 687 aaKnown RBP17.02■□□□□ 0.32
SKA3-205ENST00000465471 SCN3BQ9NY72 215 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 PCDHGB5Q9Y5G0 923 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 SIRT4Q9Y6E7 314 aaPredicted RBP17.02■□□□□ 0.32
SKA3-205ENST00000465471 NF1P21359 2839 aa17.02■□□□□ 0.32
SKA3-205ENST00000465471 ZFHX3Q15911 3703 aa17.02■□□□□ 0.31
SKA3-205ENST00000465471 TRBV2A0A0J9YWF9 115 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 hCG_1807616A0A1W2PRN6 198 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 CEACAM18A8MTB9 384 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 SRRM5B3KS81 715 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.01■□□□□ 0.31
SKA3-205ENST00000465471 LGALS8O00214 317 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 CPT2P23786 658 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 DOC2BQ14184 412 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 KCTD8Q6ZWB6 473 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 UTS2BQ765I0 119 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 NANOGP1Q8N7R0 232 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 LRRC29Q8WV35 223 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 GATAD2BQ8WXI9 593 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 SGCDQ92629 289 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 CNBD2Q96M20 576 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 TECTBQ96PL2 329 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 COMMD4Q9H0A8 199 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 TRIM36Q9NQ86 728 aa17.01■□□□□ 0.31
SKA3-205ENST00000465471 SETD2Q9BYW2 2564 aaPredicted RBP17.01■□□□□ 0.31
SKA3-205ENST00000465471 SVEP1Q4LDE5 3571 aa17■□□□□ 0.31
SKA3-205ENST00000465471 TNFRSF13BO14836 293 aaPredicted RBP17■□□□□ 0.31
SKA3-205ENST00000465471 GATBO75879 557 aaKnown RBP17■□□□□ 0.31
SKA3-205ENST00000465471 TGFAP01135 160 aa17■□□□□ 0.31
SKA3-205ENST00000465471 CRHBPP24387 322 aa17■□□□□ 0.31
SKA3-205ENST00000465471 CD80P33681 288 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms