RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 Q6ZSR3 168 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 KRT74Q7RTS7 529 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 BATF2Q8N1L9 274 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 STX19Q8N4C7 294 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 KLHL36Q8N4N3 616 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 GCSAMQ8N6F7 178 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 ZFP41Q8N8Y5 198 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 ERGIC1Q969X5 290 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 FGGYQ96C11 551 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 ADAT3Q96EY9 351 aaPredicted RBP9.77□□□□□ -0.85
CUX1-207ENST00000465461 MRPL48Q96GC5 212 aaKnown RBP9.77□□□□□ -0.85
CUX1-207ENST00000465461 C1orf159Q96HA4 380 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 CNBD2Q96M20 576 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 PDCD1LG2Q9BQ51 273 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 JAM3Q9BX67 310 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 PLCXD1Q9NUJ7 323 aa9.77□□□□□ -0.85
CUX1-207ENST00000465461 EXOSC1Q9Y3B2 195 aaKnown RBP9.77□□□□□ -0.85
CUX1-207ENST00000465461 MALRD1Q5VYJ5 2156 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 FAM230AA0A1W2PPH8 454 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 IRGMA1A4Y4 181 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 EFCAB10A6NFE3 127 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 CEACAM18A8MTB9 384 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 IFNL4K9M1U5 179 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 SLC1A7O00341 560 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 ZFPL1O95159 310 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 LHBP01229 141 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 GYPAP02724 150 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 UBCP0CG48 685 aaKnown RBP9.76□□□□□ -0.85
CUX1-207ENST00000465461 PIPP12273 146 aaPredicted RBP9.76□□□□□ -0.85
CUX1-207ENST00000465461 MYL12AP19105 171 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 MYF6P23409 242 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 ZFP36P26651 326 aaKnown RBP9.76□□□□□ -0.85
CUX1-207ENST00000465461 VHLP40337 213 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 CCR9P51686 369 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 LCN2P80188 198 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 UBE2V2Q15819 145 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 ZNF404Q494X3 552 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 TMEM155Q4W5P6 130 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 ZBTB37Q5TC79 503 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 TMEM244Q5VVB8 128 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 TMEM42Q69YG0 159 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 FAM166AQ6J272 317 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 C1orf87Q8N0U7 546 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 ZNF676Q8N7Q3 588 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 OR5T2Q8NGG2 359 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 ZNF488Q96MN9 340 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 ANKRD60Q9BZ19 345 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 TLNRD1Q9H1K6 362 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 WDR13Q9H1Z4 485 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 RASSF4Q9H2L5 321 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 OR51I2Q9H344 312 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 PLEKHA1Q9HB21 404 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 PATZ1Q9HBE1 687 aaKnown RBP9.76□□□□□ -0.85
CUX1-207ENST00000465461 SNTG1Q9NSN8 517 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 FKBP14Q9NWM8 211 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 PAK1IP1Q9NWT1 392 aaPredicted RBP9.76□□□□□ -0.85
CUX1-207ENST00000465461 CAB39Q9Y376 341 aaPredicted RBP9.76□□□□□ -0.85
CUX1-207ENST00000465461 ARHGAP32A7KAX9 2087 aa9.76□□□□□ -0.85
CUX1-207ENST00000465461 TRBV2A0A0J9YWF9 115 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 PNMA8CA0A1B0GUJ8 204 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 A0A1B0GW55 424 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 ANKRD61A6NGH8 418 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 TMEM210A6NLX4 147 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 B4DSR2 109 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 PHF1O43189 567 aaPredicted RBP9.75□□□□□ -0.85
CUX1-207ENST00000465461 AKR7A2O43488 359 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 SYNGR1O43759 233 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 INMTO95050 263 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 ISG15P05161 165 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 MSMBP08118 114 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 WNT2P09544 360 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 DUX4L2P0CJ85 424 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 DUX4L3P0CJ86 424 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 DUX4L4P0CJ87 422 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 DUX4L5P0CJ88 424 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 DUX4L6P0CJ89 424 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 DUX4L7P0CJ90 424 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 GNG3P63215 75 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 FAM76BQ5HYJ3 339 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 HAGHLQ6PII5 290 aaPredicted RBP9.75□□□□□ -0.85
CUX1-207ENST00000465461 DUX4L9Q6RFH8 374 aaPredicted RBP9.75□□□□□ -0.85
CUX1-207ENST00000465461 TMPRSS11AQ6ZMR5 421 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 RNF144BQ7Z419 303 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 ANGPTL5Q86XS5 388 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 SPICQ8N5J4 248 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 OR5A2Q8NGI9 324 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 OR13C3Q8NGS6 347 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 OR5AK2Q8NH90 309 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 RGP1Q92546 391 aaPredicted RBP9.75□□□□□ -0.85
CUX1-207ENST00000465461 RAB39BQ96DA2 213 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 ABCB9Q9NP78 766 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 HIF1ANQ9NWT6 349 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 CHCHD3Q9NX63 227 aaKnown RBP9.75□□□□□ -0.85
CUX1-207ENST00000465461 BABAM2Q9NXR7 383 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 CNOT2Q9NZN8 540 aaKnown RBP9.75□□□□□ -0.85
CUX1-207ENST00000465461 DUX4Q9UBX2 424 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 KCNS2Q9ULS6 477 aa9.75□□□□□ -0.85
CUX1-207ENST00000465461 IGKV1-27A0A075B6S5 117 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 IGKV1-9A0A0C4DH69 117 aa9.74□□□□□ -0.85
CUX1-207ENST00000465461 PQLC2LA1A4F0 135 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms