RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 MPPED2Q15777 294 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 CEP78Q5JTW2 689 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 XAF1Q6GPH4 301 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 OR13C3Q8NGS6 347 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 GPR148Q8TDV2 347 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 HPSE2Q8WWQ2 592 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 PPP1R3EQ9H7J1 279 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 NEK6Q9HC98 313 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 TREM2Q9NZC2 230 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 SLC7A11Q9UPY5 501 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 ZNF281Q9Y2X9 895 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 WIPI2Q9Y4P8 454 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 LRRC42Q9Y546 428 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 LRP5LA4QPB2 252 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 A6NLC8 198 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 ALX3O95076 343 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 LALBAP00709 142 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 CD2P06729 351 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 THBS2P35442 1172 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 PMELP40967 661 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 BTG1P62324 171 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 GPR50Q13585 617 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 CNN3Q15417 329 aaKnown RBP14.27□□□□□ -0.13
USP39-211ENST00000465282 TMEM155Q4W5P6 130 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 YIF1BQ5BJH7 314 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 PRAMEF6Q5VXH4 476 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 KCTD8Q6ZWB6 473 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 BIVMQ86UB2 503 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 LRRC28Q86X40 367 aaPredicted RBP14.27□□□□□ -0.13
USP39-211ENST00000465282 SERPINA12Q8IW75 414 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 MUC20Q8N307 709 aaPredicted RBP14.27□□□□□ -0.13
USP39-211ENST00000465282 CIARTQ8N365 385 aaPredicted RBP14.27□□□□□ -0.13
USP39-211ENST00000465282 DNAAF1Q8NEP3 725 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 OR10Z1Q8NGY1 313 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 ZNF420Q8TAQ5 688 aaPredicted RBP14.27□□□□□ -0.13
USP39-211ENST00000465282 THRSPQ92748 146 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 GHSRQ92847 366 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 FGGYQ96C11 551 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 CCDC90BQ9GZT6 254 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 ISYNA1Q9NPH2 558 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 UFSP2Q9NUQ7 469 aa14.27□□□□□ -0.13
USP39-211ENST00000465282 LSM2Q9Y333 95 aaKnown RBP14.27□□□□□ -0.13
USP39-211ENST00000465282 IGHV4-61A0A0C4DH41 118 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 ZNF732B4DXR9 585 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 IGHV2-70P01814 119 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 PRKACBP22694 351 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 MDH2P40926 338 aaKnown RBP14.26□□□□□ -0.13
USP39-211ENST00000465282 GPM6AP51674 278 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 FUT6P51993 359 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 KCNJ8Q15842 424 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 WDR86Q86TI4 376 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 ZNF573Q86YE8 665 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 C11orf53Q8IXP5 236 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 SPICQ8N5J4 248 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 PARP16Q8N5Y8 322 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 OR51A4Q8NGJ6 313 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 OR5D14Q8NGL3 314 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 SGCDQ92629 289 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 ADAT3Q96EY9 351 aaPredicted RBP14.26□□□□□ -0.13
USP39-211ENST00000465282 OR51I2Q9H344 312 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 GPR173Q9NS66 373 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 C1orf123Q9NWV4 160 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 DHDHQ9UQ10 334 aa14.26□□□□□ -0.13
USP39-211ENST00000465282 SIRT4Q9Y6E7 314 aaPredicted RBP14.26□□□□□ -0.13
USP39-211ENST00000465282 PPIAL4EA0A075B759 164 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 IGHV3-64DA0A0J9YX35 117 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 PQLC2LA1A4F0 135 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 A6NIN4 97 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 PPIAL4DF5H284 164 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 H3BSH0 61 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 LHBP01229 141 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 MT-ND2P03891 347 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 PPIAL4FP0DN26 164 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 CELP19835 753 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 MED22Q15528 200 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 TBCEQ15813 527 aaPredicted RBP14.25□□□□□ -0.13
USP39-211ENST00000465282 UBE2V2Q15819 145 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 WDR82Q6UXN9 313 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 SCCPDHQ8NBX0 429 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 OR10AC1Q8NH08 325 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 ZNF671Q8TAW3 534 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 TSEN15Q8WW01 171 aaKnown RBP14.25□□□□□ -0.13
USP39-211ENST00000465282 SPSB1Q96BD6 273 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 RAB39BQ96DA2 213 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 PPIAL4AQ9Y536 164 aa14.25□□□□□ -0.13
USP39-211ENST00000465282 hCG_1807616A0A1W2PRN6 198 aa14.24□□□□□ -0.13
USP39-211ENST00000465282 CDIPTO14735 213 aa14.24□□□□□ -0.13
USP39-211ENST00000465282 SMAD7O15105 426 aaKnown RBP14.24□□□□□ -0.13
USP39-211ENST00000465282 LMX1BO60663 402 aa14.24□□□□□ -0.13
USP39-211ENST00000465282 CYB5R3P00387 301 aaPredicted RBP14.24□□□□□ -0.13
USP39-211ENST00000465282 OCM2P0CE71 109 aa14.24□□□□□ -0.13
USP39-211ENST00000465282 GZMKP49863 264 aa14.24□□□□□ -0.13
USP39-211ENST00000465282 ZMYND11Q15326 602 aa14.24□□□□□ -0.13
USP39-211ENST00000465282 TMEM249Q2WGJ8 235 aa14.24□□□□□ -0.13
USP39-211ENST00000465282 AVPI1Q5T686 147 aa14.24□□□□□ -0.13
USP39-211ENST00000465282 SVOPQ8N4V2 548 aa14.24□□□□□ -0.13
USP39-211ENST00000465282 MS4A15Q8N5U1 240 aa14.24□□□□□ -0.13
USP39-211ENST00000465282 CLDND2Q8NHS1 167 aa14.24□□□□□ -0.13
USP39-211ENST00000465282 C1orf159Q96HA4 380 aa14.24□□□□□ -0.13
USP39-211ENST00000465282 PGLYRP3Q96LB9 341 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms