RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 RRADP55042 308 aa17.15■□□□□ 0.34
POLR2J3-203ENST00000464525 RAP2BP61225 183 aa17.15■□□□□ 0.34
POLR2J3-203ENST00000464525 SEMA6DQ8NFY4 1073 aa17.15■□□□□ 0.34
POLR2J3-203ENST00000464525 PCNPQ8WW12 178 aaKnown RBP17.15■□□□□ 0.34
POLR2J3-203ENST00000464525 RYDENQ9NUL5 291 aaKnown RBP17.15■□□□□ 0.34
POLR2J3-203ENST00000464525 OPN4Q9UHM6 478 aa17.15■□□□□ 0.34
POLR2J3-203ENST00000464525 ZNF107Q9UII5 783 aaPredicted RBP17.15■□□□□ 0.34
POLR2J3-203ENST00000464525 ANKRD34BA5PLL1 514 aa17.14■□□□□ 0.34
POLR2J3-203ENST00000464525 CXCL2P19875 107 aa17.14■□□□□ 0.34
POLR2J3-203ENST00000464525 GRK1Q15835 563 aa17.14■□□□□ 0.34
POLR2J3-203ENST00000464525 RIPPLY2Q5TAB7 128 aa17.14■□□□□ 0.34
POLR2J3-203ENST00000464525 C11orf88Q6PI97 169 aa17.14■□□□□ 0.34
POLR2J3-203ENST00000464525 ZNF767PQ75MW2 155 aa17.14■□□□□ 0.34
POLR2J3-203ENST00000464525 NAXEQ8NCW5 288 aa17.14■□□□□ 0.34
POLR2J3-203ENST00000464525 ZNF680Q8NEM1 530 aa17.14■□□□□ 0.34
POLR2J3-203ENST00000464525 MAFIPQ8WZ33 124 aa17.14■□□□□ 0.34
POLR2J3-203ENST00000464525 HAS2Q92819 552 aa17.14■□□□□ 0.34
POLR2J3-203ENST00000464525 ALX4Q9H161 411 aaPredicted RBP17.14■□□□□ 0.34
POLR2J3-203ENST00000464525 ANGPTL7O43827 346 aa17.14■□□□□ 0.33
POLR2J3-203ENST00000464525 SLC22A5O76082 557 aa17.14■□□□□ 0.33
POLR2J3-203ENST00000464525 GSK3AP49840 483 aa17.14■□□□□ 0.33
POLR2J3-203ENST00000464525 MEOX1P50221 254 aa17.14■□□□□ 0.33
POLR2J3-203ENST00000464525 RPS27AP62979 156 aaKnown RBP17.14■□□□□ 0.33
POLR2J3-203ENST00000464525 FOXC1Q12948 553 aa17.14■□□□□ 0.33
POLR2J3-203ENST00000464525 DHRS2Q13268 280 aa17.14■□□□□ 0.33
POLR2J3-203ENST00000464525 MEF2DQ14814 521 aa17.14■□□□□ 0.33
POLR2J3-203ENST00000464525 DEFB109BQ30KR1 87 aa17.14■□□□□ 0.33
POLR2J3-203ENST00000464525 PDSS1Q5T2R2 415 aa17.14■□□□□ 0.33
POLR2J3-203ENST00000464525 CPEB3Q8NE35 698 aaKnown RBP17.14■□□□□ 0.33
POLR2J3-203ENST00000464525 FDCSPQ8NFU4 85 aa17.14■□□□□ 0.33
POLR2J3-203ENST00000464525 OR4K15Q8NH41 348 aa17.14■□□□□ 0.33
POLR2J3-203ENST00000464525 FN3KRPQ9HA64 309 aa17.14■□□□□ 0.33
POLR2J3-203ENST00000464525 ZNF230Q9UIE0 474 aaPredicted RBP17.14■□□□□ 0.33
POLR2J3-203ENST00000464525 FAM230AA0A1W2PPH8 454 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 PLSCR5A0PG75 271 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 SCGNO76038 276 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 CFDP00746 253 aaPredicted RBP17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 SP1P08047 785 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 ZNF708P17019 499 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 HOXD11P31277 338 aaPredicted RBP17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 ARG2P78540 354 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 MICBQ29980 383 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 Q6ZSR3 168 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 MDS2Q8NDY4 140 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 OR56B1Q8NGI3 324 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 ELMOD3Q96FG2 381 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 CST11Q9H112 138 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 LIPGQ9Y5X9 500 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 IGKV1-27A0A075B6S5 117 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 SPRY1O43609 319 aaPredicted RBP17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 BLVRBP30043 206 aaPredicted RBP17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 MTCP1P56278 107 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 ARF1P84077 181 aaKnown RBP17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 PABPC1L2AQ5JQF8 200 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 C12orf45Q8N5I9 185 aaPredicted RBP17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 CCDC107Q8WV48 283 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 FBXW5Q969U6 566 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 PRRT1Q99946 306 aa17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 URM1Q9BTM9 101 aaKnown RBP17.13■□□□□ 0.33
POLR2J3-203ENST00000464525 MFNGO00587 321 aa17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 NOS1APO75052 506 aaPredicted RBP17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 MMP7P09237 267 aaPredicted RBP17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 ZNF92Q03936 586 aa17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 ARFRP1Q13795 201 aa17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 LIN54Q6MZP7 749 aa17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 ADAD2Q8NCV1 583 aaKnown RBP17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 NUDT16L1Q9BRJ7 211 aaKnown RBP17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 ST6GALNAC5Q9BVH7 336 aa17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 ZNF581Q9P0T4 197 aa17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 PLEKHA6Q9Y2H5 1048 aa17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 F5H5P2 479 aa17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 HLA-AP01891 365 aaKnown RBP17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 GSTP1P09211 210 aaKnown RBP17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 UBBP0CG47 229 aa17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 TMEM225BP0DP42 221 aa17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 CCL2P13500 99 aa17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 PPIAP62937 165 aaKnown RBP17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 FAM89BQ8N5H3 189 aa17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 S100A13Q99584 98 aa17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 DEFB127Q9H1M4 99 aa17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 SLC2A8Q9NY64 477 aa17.12■□□□□ 0.33
POLR2J3-203ENST00000464525 IGKV3D-15A0A087WSY6 115 aa17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 ZNF587BE7ETH6 402 aa17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 IFNA6P05013 189 aa17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 RIPPLY1Q0D2K3 151 aa17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 LY6G6FQ5SQ64 297 aa17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 OR8H3Q8N146 312 aa17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 CITED4Q96RK1 184 aa17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 PRRG4Q9BZD6 226 aa17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 B3GNT2Q9NY97 397 aa17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 H3BUI4 141 aa17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 LINC01387J3KSC0 135 aa17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 EFSO43281 561 aa17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 NME2P1O60361 137 aa17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 ALX3O95076 343 aa17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 NME2P22392 152 aa17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 NFYAP23511 347 aaPredicted RBP17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 GABRR1P24046 479 aa17.11■□□□□ 0.33
POLR2J3-203ENST00000464525 PPP1R1AQ13522 171 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms