RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 SMARCD1Q96GM5 515 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 SNF8Q96H20 258 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 ALS2CR12Q96Q35 445 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 NAPGQ99747 312 aaPredicted RBP2.27□□□□□ -2.05
CLK1-208ENST00000464454 GABRG3Q99928 467 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 ARV1Q9H2C2 271 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 ZSCAN16Q9H4T2 348 aaPredicted RBP2.27□□□□□ -2.05
CLK1-208ENST00000464454 MARCOQ9UEW3 520 aaPredicted RBP2.27□□□□□ -2.05
CLK1-208ENST00000464454 FLVCR2Q9UPI3 526 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 GPR179Q6PRD1 2367 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 TNIKQ9UKE5 1360 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 ISPDA4D126 451 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 BTNL10A8MVZ5 291 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 CCDC22O60826 627 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 SLC35B1P78383 322 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 ATP6V1FQ16864 119 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 KRTAP13-2Q52LG2 175 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 KDM4DQ6B0I6 523 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 ZNF101Q8IZC7 436 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 SLC7A5P1Q8MH63 180 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 SFXN5Q8TD22 340 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 TMEM234Q8WY98 164 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 CPNE4Q96A23 557 aaPredicted RBP2.26□□□□□ -2.05
CLK1-208ENST00000464454 Q96MT0 163 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 IP6K3Q96PC2 410 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 OR51B5Q9H339 312 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 GAL3ST2Q9H3Q3 398 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 CSNK1G1Q9HCP0 422 aa2.26□□□□□ -2.05
CLK1-208ENST00000464454 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.25□□□□□ -2.05
CLK1-208ENST00000464454 JCADQ9P266 1359 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 TICRRQ7Z2Z1 1910 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 TRAV8-4A0A0B4J246 113 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 IGHV2OR16-5A0A0B4J2B6 119 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 CCL15-CCL14A0A0B4J2E2 113 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 H7C2Y5 167 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 LGALS9O00182 355 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 PLEKHA8P1O95397 391 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 IGLV3-19P01714 112 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 P01737 135 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 CELP19835 753 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 CPN2P22792 545 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 HCCSP53701 268 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 TAS2R43P59537 309 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 TAS2R60P59551 318 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 PPP1CAP62136 330 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 CCL15Q16663 113 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 CPTPQ5TA50 214 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 OR5M1Q8NGP8 315 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 MITD1Q8WV92 249 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 ING5Q8WYH8 240 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 FAM131CQ96AQ9 280 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 GPR82Q96P67 336 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 TSNAXQ99598 290 aaKnown RBP2.25□□□□□ -2.05
CLK1-208ENST00000464454 MARVELD1Q9BSK0 173 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 PLEKHF2Q9H8W4 249 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 VAX2Q9UIW0 290 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 CFL2Q9Y281 166 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 KLF12Q9Y4X4 402 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 SCN4AP35499 1836 aa2.25□□□□□ -2.05
CLK1-208ENST00000464454 TRAV8-6A0A0B4J262 113 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 A8MWL6 223 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 TRAPPC6AO75865 159 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 SMC2O95347 1197 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 MMP7P09237 267 aaPredicted RBP2.24□□□□□ -2.05
CLK1-208ENST00000464454 IL3RAP26951 378 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 PRSS3P35030 304 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 CMC4P56277 68 aaPredicted RBP2.24□□□□□ -2.05
CLK1-208ENST00000464454 LUZP6Q538Z0 58 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 KLHL12Q53G59 568 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 CAVIN4Q5BKX8 364 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 PRR9Q5T870 116 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 HHATQ5VTY9 493 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 PRSS54Q6PEW0 395 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 ASCL4Q6XD76 172 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 ORMDL3Q8N138 153 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 MIR7-3HGQ8N6C7 128 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 SLC25A29Q8N8R3 303 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 OR2Z1Q8NG97 314 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 FRMD8P1Q9BZ68 369 aaPredicted RBP2.24□□□□□ -2.05
CLK1-208ENST00000464454 STMN4Q9H169 189 aaPredicted RBP2.24□□□□□ -2.05
CLK1-208ENST00000464454 C6orf50Q9HD87 102 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 TMEM100Q9NV29 134 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 TAS2R5Q9NYW4 299 aa2.24□□□□□ -2.05
CLK1-208ENST00000464454 NPHP4O75161 1426 aaPredicted RBP2.24□□□□□ -2.05
CLK1-208ENST00000464454 COL1A2P08123 1366 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 MROH5Q6ZUA9 1318 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 ZNF98A6NK75 572 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 CEACAM18A8MTB9 384 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 K7EM74 188 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 GATCO43716 136 aaKnown RBP2.23□□□□□ -2.05
CLK1-208ENST00000464454 KDELR3O43731 214 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 LHBP01229 141 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 MAS1P04201 325 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 NELFEP18615 380 aaKnown RBP2.23□□□□□ -2.05
CLK1-208ENST00000464454 NTF3P20783 257 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 GNRHRP30968 328 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 MPV17P39210 176 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 BTN1A1Q13410 526 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 MAPRE2Q15555 327 aa2.23□□□□□ -2.05
CLK1-208ENST00000464454 HNRNPA1L2Q32P51 320 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms