RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 RBP2P50120 134 aa13.21□□□□□ -0.29
GYPC-205ENST00000464053 FUT6P51993 359 aa13.21□□□□□ -0.29
GYPC-205ENST00000464053 ZP1P60852 638 aa13.21□□□□□ -0.29
GYPC-205ENST00000464053 CEACAM21Q3KPI0 293 aa13.21□□□□□ -0.29
GYPC-205ENST00000464053 C16orf87Q6PH81 154 aa13.21□□□□□ -0.29
GYPC-205ENST00000464053 METAP1DQ6UB28 335 aaPredicted RBP13.21□□□□□ -0.29
GYPC-205ENST00000464053 TMEM108Q6UXF1 575 aa13.21□□□□□ -0.29
GYPC-205ENST00000464053 LINC01560Q8TB33 94 aa13.21□□□□□ -0.29
GYPC-205ENST00000464053 TNFAIP8L1Q8WVP5 186 aa13.21□□□□□ -0.29
GYPC-205ENST00000464053 ITFG2Q969R8 447 aa13.21□□□□□ -0.29
GYPC-205ENST00000464053 FAM46BQ96A09 425 aa13.21□□□□□ -0.29
GYPC-205ENST00000464053 RADILQ96JH8 1075 aa13.21□□□□□ -0.29
GYPC-205ENST00000464053 GAL3ST1Q99999 423 aa13.21□□□□□ -0.29
GYPC-205ENST00000464053 KCNJ16Q9NPI9 418 aa13.21□□□□□ -0.29
GYPC-205ENST00000464053 SLC7A11Q9UPY5 501 aa13.21□□□□□ -0.29
GYPC-205ENST00000464053 IQCF6A8MYZ5 107 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 B8ZZF3 427 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 SPRY1O43609 319 aaPredicted RBP13.2□□□□□ -0.3
GYPC-205ENST00000464053 ZG16O60844 167 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 BPNT1O95861 308 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 PLATP00750 562 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 NAT2P11245 290 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 TALDO1P37837 337 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 BSPH1Q075Z2 132 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 TFF3Q07654 80 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 ZNF718Q3SXZ3 478 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 PYDC2Q56P42 97 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 MBNL2Q5VZF2 373 aaKnown RBP13.2□□□□□ -0.3
GYPC-205ENST00000464053 XKRXQ6PP77 449 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 LHFPL2Q6ZUX7 228 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 LRP11Q86VZ4 500 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 PIAS4Q8N2W9 510 aaPredicted RBP13.2□□□□□ -0.3
GYPC-205ENST00000464053 FTMTQ8N4E7 242 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 TMEM104Q8NE00 496 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 OR5P3Q8WZ94 311 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 ITPKCQ96DU7 683 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 TECTBQ96PL2 329 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 MRPL15Q9P015 296 aaKnown RBP13.2□□□□□ -0.3
GYPC-205ENST00000464053 PURGQ9UJV8 347 aaKnown RBP13.2□□□□□ -0.3
GYPC-205ENST00000464053 ING4Q9UNL4 249 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 HCFC1P51610 2035 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 A0A1W2PP11 408 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 PQLC2LA1A4F0 135 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 ANGPTL7O43827 346 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 CTAG2O75638 210 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 TUBG1P23258 451 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 CDK2P24941 298 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 PTAFRP25105 342 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 PITPNBP48739 271 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 GPM6AP51674 278 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 ATP1B3P54709 279 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 BAK1Q16611 211 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 RGS7BPQ6MZT1 257 aaPredicted RBP13.2□□□□□ -0.3
GYPC-205ENST00000464053 MTFR2Q6P444 385 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 VHLLQ6RSH7 139 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 CALHM1Q8IU99 346 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 PNLDC1Q8NA58 520 aaKnown RBP13.2□□□□□ -0.3
GYPC-205ENST00000464053 OR10K1Q8NGX5 313 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 RAB40AQ8WXH6 277 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 S100A16Q96FQ6 103 aaKnown RBP13.2□□□□□ -0.3
GYPC-205ENST00000464053 ABHD1Q96SE0 405 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 TUBG2Q9NRH3 451 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 ABCB10Q9NRK6 738 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 C14orf119Q9NWQ9 140 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 SPEF1Q9Y4P9 236 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 MPC1Q9Y5U8 109 aa13.2□□□□□ -0.3
GYPC-205ENST00000464053 TMEM14DPA8MWL7 114 aa13.19□□□□□ -0.3
GYPC-205ENST00000464053 ABCD4O14678 606 aa13.19□□□□□ -0.3
GYPC-205ENST00000464053 C1QL1O75973 258 aa13.19□□□□□ -0.3
GYPC-205ENST00000464053 KDM4BO94953 1096 aa13.19□□□□□ -0.3
GYPC-205ENST00000464053 SELEP16581 610 aa13.19□□□□□ -0.3
GYPC-205ENST00000464053 KITLGP21583 273 aa13.19□□□□□ -0.3
GYPC-205ENST00000464053 GCH1P30793 250 aa13.19□□□□□ -0.3
GYPC-205ENST00000464053 GLRXP35754 106 aa13.19□□□□□ -0.3
GYPC-205ENST00000464053 SSX8Q7RTT4 187 aa13.19□□□□□ -0.3
GYPC-205ENST00000464053 C1orf174Q8IYL3 243 aa13.19□□□□□ -0.3
GYPC-205ENST00000464053 ZNF843Q8N446 348 aa13.19□□□□□ -0.3
GYPC-205ENST00000464053 TMEM171Q8WVE6 324 aa13.19□□□□□ -0.3
GYPC-205ENST00000464053 RNF170Q96K19 258 aa13.19□□□□□ -0.3
GYPC-205ENST00000464053 ATG5Q9H1Y0 275 aa13.19□□□□□ -0.3
GYPC-205ENST00000464053 NEK6Q9HC98 313 aa13.19□□□□□ -0.3
GYPC-205ENST00000464053 MRPS7Q9Y2R9 242 aaKnown RBP13.19□□□□□ -0.3
GYPC-205ENST00000464053 ZNF732B4DXR9 585 aa13.18□□□□□ -0.3
GYPC-205ENST00000464053 H0YL77 283 aa13.18□□□□□ -0.3
GYPC-205ENST00000464053 UPK1BO75841 260 aa13.18□□□□□ -0.3
GYPC-205ENST00000464053 TMEM225BP0DP42 221 aa13.18□□□□□ -0.3
GYPC-205ENST00000464053 ALDH3B1P43353 468 aa13.18□□□□□ -0.3
GYPC-205ENST00000464053 SLC22A6Q4U2R8 563 aa13.18□□□□□ -0.3
GYPC-205ENST00000464053 OR5A2Q8NGI9 324 aa13.18□□□□□ -0.3
GYPC-205ENST00000464053 ITLN2Q8WWU7 325 aaPredicted RBP13.18□□□□□ -0.3
GYPC-205ENST00000464053 BANF2Q9H503 90 aa13.18□□□□□ -0.3
GYPC-205ENST00000464053 IGKV1-12A0A0C4DH73 117 aa13.18□□□□□ -0.3
GYPC-205ENST00000464053 TIMM8AO60220 97 aaPredicted RBP13.18□□□□□ -0.3
GYPC-205ENST00000464053 IGKV1D-12P01611 117 aa13.18□□□□□ -0.3
GYPC-205ENST00000464053 PTHLHP12272 177 aa13.18□□□□□ -0.3
GYPC-205ENST00000464053 ZNF250P15622 560 aa13.18□□□□□ -0.3
GYPC-205ENST00000464053 RAB6AP20340 208 aa13.18□□□□□ -0.3
GYPC-205ENST00000464053 PTBP1P26599 531 aaKnown RBP eCLIP13.18□□□□□ -0.39e-7■■■■□ 19.4
GYPC-205ENST00000464053 CAPZA1P52907 286 aa13.18□□□□□ -0.3
GYPC-205ENST00000464053 PDZK1IP1Q13113 114 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms