RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 SEMA6DQ8NFY4 1073 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 PP6455Q8WZ26 134 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 SARAFQ96BY9 339 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 ABHD17AQ96GS6 310 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 CHST5Q9GZS9 411 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 MED9Q9NWA0 146 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 LUZP4Q9P127 313 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 GLS2Q9UI32 602 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 SPTBN4Q9H254 2564 aa12.59□□□□□ -0.39
HDAC6-213ENST00000462730 FREM1Q5H8C1 2179 aa12.59□□□□□ -0.39
HDAC6-213ENST00000462730 METTL21EPA6NDL7 271 aa12.59□□□□□ -0.39
HDAC6-213ENST00000462730 HLA-HP01893 362 aa12.59□□□□□ -0.39
HDAC6-213ENST00000462730 UBE2V2Q15819 145 aa12.59□□□□□ -0.39
HDAC6-213ENST00000462730 SFRP4Q6FHJ7 346 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-213ENST00000462730 NLRC3Q7RTR2 1065 aa12.59□□□□□ -0.39
HDAC6-213ENST00000462730 OR5M9Q8NGP3 310 aa12.59□□□□□ -0.39
HDAC6-213ENST00000462730 SSC4DQ8WTU2 575 aa12.59□□□□□ -0.39
HDAC6-213ENST00000462730 EXTL1Q92935 676 aa12.59□□□□□ -0.39
HDAC6-213ENST00000462730 C10orf35Q96D05 121 aa12.59□□□□□ -0.39
HDAC6-213ENST00000462730 CCDC120Q96HB5 630 aa12.59□□□□□ -0.39
HDAC6-213ENST00000462730 PPA2Q9H2U2 334 aa12.59□□□□□ -0.39
HDAC6-213ENST00000462730 KIF25Q9UIL4 384 aa12.59□□□□□ -0.39
HDAC6-213ENST00000462730 FLVCR2Q9UPI3 526 aa12.59□□□□□ -0.39
HDAC6-213ENST00000462730 RTTNQ86VV8 2226 aa12.59□□□□□ -0.39
HDAC6-213ENST00000462730 TMEM14DPA8MWL7 114 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 PRAF2O60831 178 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 TOXO94900 526 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 CSF1P09603 554 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 CD79AP11912 226 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 PSMB1P20618 241 aaKnown RBP12.58□□□□□ -0.4
HDAC6-213ENST00000462730 ACKR3P25106 362 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 VEGFCP49767 419 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 B2MP61769 119 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 FAAP20Q6NZ36 180 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 OR2W3Q7Z3T1 314 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 GPX8Q8TED1 209 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 PCNPQ8WW12 178 aaKnown RBP12.58□□□□□ -0.4
HDAC6-213ENST00000462730 TRIB1Q96RU8 372 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 GP6Q9HCN6 339 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 GPR173Q9NS66 373 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 FBLN5Q9UBX5 448 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 ATPIF1Q9UII2 106 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 TP53TG5Q9Y2B4 290 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 ARHGAP21Q5T5U3 1957 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 ZNF503-AS2A6NEH8 195 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 DHRS7CA6NNS2 312 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 CFDP00746 253 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-213ENST00000462730 ZNF250P15622 560 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 PRSS12P56730 875 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 KISS1Q15726 138 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 TBR1Q16650 682 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 PLEKHN1Q494U1 663 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-213ENST00000462730 RAB12Q6IQ22 244 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 FTMTQ8N4E7 242 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 PNLDC1Q8NA58 520 aaKnown RBP12.58□□□□□ -0.4
HDAC6-213ENST00000462730 PIGTQ969N2 578 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 CMBLQ96DG6 245 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 GMPPAQ96IJ6 420 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-213ENST00000462730 C1orf147Q96MC9 270 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-213ENST00000462730 NOX3Q9HBY0 568 aa12.58□□□□□ -0.4
HDAC6-213ENST00000462730 PRRC2CQ9Y520 2896 aaKnown RBP12.57□□□□□ -0.4
HDAC6-213ENST00000462730 ATMQ13315 3056 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 A0A1B0GUH1 482 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 FAM25EA8MYX2 175 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 M0R233 179 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 SULT1C2O00338 296 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 SCO1O75880 301 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 MPIG6BO95866 241 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 FCER2P06734 321 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 LPLP06858 475 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 RRASP10301 218 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 OR3A2P47893 321 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 TMPRSS3P57727 454 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 AANATQ16613 207 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 METTL11BQ5VVY1 283 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 RPUSD3Q6P087 351 aaKnown RBP12.57□□□□□ -0.4
HDAC6-213ENST00000462730 Q6ZTK2 550 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 CHST4Q8NCG5 386 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 OR5D18Q8NGL1 313 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 SEH1LQ96EE3 360 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 OR10A4Q9H209 315 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 RGCCQ9H4X1 137 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 ZMAT3Q9HA38 289 aaKnown RBP12.57□□□□□ -0.4
HDAC6-213ENST00000462730 SCPEP1Q9HB40 452 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 TAS2R8Q9NYW2 309 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 ZNF391Q9UJN7 358 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 RAXQ9Y2V3 346 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 MAB21L2Q9Y586 359 aa12.57□□□□□ -0.4
HDAC6-213ENST00000462730 LOC100509620A0A075B734 347 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 TMEM235A6NFC5 223 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 RAB27BO00194 218 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 SS18L1O75177 396 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-213ENST00000462730 UBBP0CG47 229 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 GTF2F2P13984 249 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 EDN3P14138 238 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 MPGP29372 298 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 FAUP35544 74 aaKnown RBP12.56□□□□□ -0.4
HDAC6-213ENST00000462730 ZNF92Q03936 586 aa12.56□□□□□ -0.4
HDAC6-213ENST00000462730 SSBP1Q04837 148 aaKnown RBP12.56□□□□□ -0.4
HDAC6-213ENST00000462730 FBXW9Q5XUX1 488 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms