RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 SP140LQ9H930 580 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 C1RLQ9NZP8 487 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 NUFIP1Q9UHK0 495 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 RHBDD3Q9Y3P4 386 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 RYR3Q15413 4870 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 KIR2DS1A0A191URI9 304 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 A0A1B0GTI1 187 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 TMEM269A0A1B0GVZ9 245 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 A0A1W2PQL4 384 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 PHYHO14832 338 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 SLC16A6O15403 523 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 NDUFA7O95182 113 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 FSTL3O95633 263 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 BAG2O95816 211 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR2T7P0C7T2 308 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 CFL1P23528 166 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 CPT2P23786 658 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 PEX2P28328 305 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 PITPNBP48739 271 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 FGF12P61328 243 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 GNB2P62879 340 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 CSNK2BP67870 215 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 EGR3Q06889 387 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 POU4F2Q12837 409 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 PRDX4Q13162 271 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 TMED1Q13445 227 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 RCN1Q15293 331 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF829Q3KNS6 432 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 RUSC1-AS1Q66K80 236 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 LYPD2Q6UXB3 125 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 BTNL3Q6UXE8 466 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 Q6YL49 198 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF841Q6ZN19 808 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF826PQ6ZT77 177 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 KIR3DL3Q8N743 410 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 C19orf18Q8NEA5 215 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 CSNK2A3Q8NEV1 391 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR10H4Q8NGA5 316 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR2T27Q8NH04 317 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 APH1BQ8WW43 257 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 TRUB1Q8WWH5 349 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 ERGIC1Q969X5 290 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 NEIL1Q96FI4 390 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 NUDT16L1Q9BRJ7 211 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 MROQ9BYG7 248 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 CHIAQ9BZP6 476 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 TLNRD1Q9H1K6 362 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 MOB1AQ9H8S9 216 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZFAND3Q9H8U3 227 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 UFSP2Q9NUQ7 469 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 FAM118AQ9NWS6 357 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 IMPAD1Q9NX62 359 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 H2AFY2Q9P0M6 372 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 MIOXQ9UGB7 285 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 IKZF2Q9UKS7 526 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 NOP16Q9Y3C1 178 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 ORC6Q9Y5N6 252 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 GMPPBQ9Y5P6 360 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 R4GMQ9 66 aa6.56□□□□□ -1.36
CDC42BPA-210ENST00000462553 A0A1B0GUS0 222 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 LOC100130705A0A1B0GUX0 176 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 ANKRD30BLA7E2S9 258 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 LOC110117498-PIK3R3F6TDL0 507 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 TNFRSF13BO14836 293 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 FCN3O75636 299 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 CST4P01036 141 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 KNG1P01042 644 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 LHBP01229 141 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 SFTPBP07988 381 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 MELTFP08582 738 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 MMP9P14780 707 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 CCL1P22362 96 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 PSMB10P40306 273 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF91Q05481 1191 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 GABPB1Q06547 395 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 LPCAT4Q643R3 524 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 WDR25Q64LD2 544 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 OLFML2AQ68BL7 652 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 FIP1L1Q6UN15 594 aaKnown RBP6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 CATSPERDQ86XM0 798 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 ELMOD2Q8IZ81 293 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 PRSS35Q8N3Z0 413 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 TMEM86BQ8N661 226 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 GCSAMQ8N6F7 178 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 SPERTQ8NA61 448 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 PLPP7Q8NBV4 271 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR1M1Q8NGA1 313 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR8B3Q8NGG8 313 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR4F5Q8NH21 305 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 RHOXF1Q8NHV9 184 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR51E1Q8TCB6 317 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR5P3Q8WZ94 311 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 RORBQ92753 470 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 STMN2Q93045 179 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 RFKQ969G6 155 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 LGALS12Q96DT0 336 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 RNFT2Q96EX2 444 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 RDH12Q96NR8 316 aa6.55□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR8B2Q96RD0 313 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms