RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 ZNF829Q3KNS6 432 aaPredicted RBP4.83□□□□□ -1.64
VPS36-202ENST00000462289 SPATA46Q5T0L3 261 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 PLEKHG7Q6ZR37 379 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 C8orf59Q8N0T1 100 aaPredicted RBP4.83□□□□□ -1.64
VPS36-202ENST00000462289 ZCCHC24Q8N2G6 241 aaKnown RBP4.83□□□□□ -1.64
VPS36-202ENST00000462289 PRSS35Q8N3Z0 413 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 CCDC54Q8NEL0 328 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 ZNF555Q8NEP9 628 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 OR13G1Q8NGZ3 307 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 OR2G2Q8NGZ5 317 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 OR52N1Q8NH53 320 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 OR2AE1Q8NHA4 323 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 CNIH3Q8TBE1 160 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 THEM6Q8WUY1 208 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 ST8SIA2Q92186 375 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 GGHQ92820 318 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 YIPF5Q969M3 257 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 ERGIC1Q969X5 290 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 C10orf35Q96D05 121 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 PERPQ96FX8 193 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 RHNO1Q9BSD3 238 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 CDCA4Q9BXL8 241 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 FGF23Q9GZV9 251 aaPredicted RBP4.83□□□□□ -1.64
VPS36-202ENST00000462289 SLC22A4Q9H015 551 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 RAB1BQ9H0U4 201 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 VCXQ9H320 206 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 CHODLQ9H9P2 273 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 PAK1IP1Q9NWT1 392 aaPredicted RBP4.83□□□□□ -1.64
VPS36-202ENST00000462289 H2AFY2Q9P0M6 372 aaPredicted RBP4.83□□□□□ -1.64
VPS36-202ENST00000462289 TAAR3PQ9P1P4 343 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 IL19Q9UHD0 177 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 RAB26Q9ULW5 256 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 FZR1Q9UM11 496 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 LSM2Q9Y333 95 aaKnown RBP4.83□□□□□ -1.64
VPS36-202ENST00000462289 V9GYS6 101 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 JMJD1CQ15652 2540 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 CUBNO60494 3623 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 IGHV4-30-2A0A087WSY4 118 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 TMEM269A0A1B0GVZ9 245 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 IRGMA1A4Y4 181 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 IFNL4K9M1U5 179 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 MAGEB4O15481 346 aaPredicted RBP4.82□□□□□ -1.64
VPS36-202ENST00000462289 OGG1O15527 345 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 GMDSO60547 372 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 DHRS3O75911 302 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 LY6HO94772 140 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 APOL3O95236 402 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 LHBP01229 141 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 HTR1AP08908 422 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 ACAA1P09110 424 aaPredicted RBP4.82□□□□□ -1.64
VPS36-202ENST00000462289 CD37P11049 281 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 SLC2A1P11166 492 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 SLC25A16P16260 332 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 CCNOP22674 350 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 CPT2P23786 658 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 CRHBPP24387 322 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 GCH1P30793 250 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 VHLP40337 213 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 PMELP40967 661 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 NR4A2P43354 598 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 MAGEB1P43366 347 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 TMEM33P57088 247 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 OR12D2P58182 307 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 SELENOVP59797 346 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 ACTA2P62736 377 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 ACTG2P63267 376 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 BDH1Q02338 343 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 MALLQ13021 153 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 CLEC12BQ2HXU8 276 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 CCDC58Q4VC31 144 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 KLHL22Q53GT1 634 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 WDR38Q5JTN6 314 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 C6orf141Q5SZD1 244 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 ASPHD2Q6ICH7 369 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 OR2T2Q6IF00 324 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 TMEM154Q6P9G4 183 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 PGAP1Q75T13 922 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 KRT77Q7Z794 578 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.82□□□□□ -1.64
VPS36-202ENST00000462289 WDR86Q86TI4 376 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 C11orf53Q8IXP5 236 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 ZNF525Q8N782 197 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 SPERTQ8NA61 448 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 CSNK2A3Q8NEV1 391 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 OR56B2PQ8NGI1 322 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 HPSE2Q8WWQ2 592 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 RDH5Q92781 318 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 OTULINQ96BN8 352 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 REEP6Q96HR9 211 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 MLST8Q9BVC4 326 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 PBOV1Q9GZY1 135 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 VCX3BQ9H321 246 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 AMBNQ9NP70 447 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 CENPMQ9NSP4 180 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 ACOXLQ9NUZ1 547 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 PTTG3PQ9NZH4 202 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 SLC22A13Q9Y226 551 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 CAB39Q9Y376 341 aaPredicted RBP4.82□□□□□ -1.64
VPS36-202ENST00000462289 PCDHGB5Q9Y5G0 923 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 MPC1Q9Y5U8 109 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms