RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 GPR148Q8TDV2 347 aa18.96■□□□□ 0.63
C9orf3-209ENST00000460573 RAB1CQ92928 201 aa18.96■□□□□ 0.63
C9orf3-209ENST00000460573 RNF170Q96K19 258 aa18.96■□□□□ 0.63
C9orf3-209ENST00000460573 NR1H4Q96RI1 486 aaPredicted RBP18.96■□□□□ 0.63
C9orf3-209ENST00000460573 REG4Q9BYZ8 158 aa18.96■□□□□ 0.63
C9orf3-209ENST00000460573 CACNG2Q9Y698 323 aa18.96■□□□□ 0.63
C9orf3-209ENST00000460573 SIRT4Q9Y6E7 314 aaPredicted RBP18.96■□□□□ 0.63
C9orf3-209ENST00000460573 NIPBLQ6KC79 2804 aaeCLIP18.96■□□□□ 0.63
C9orf3-209ENST00000460573 INAFM1C9JVW0 142 aa18.95■□□□□ 0.62
C9orf3-209ENST00000460573 H3BSH0 61 aa18.95■□□□□ 0.62
C9orf3-209ENST00000460573 PPIHO43447 177 aaKnown RBP18.95■□□□□ 0.62
C9orf3-209ENST00000460573 GNG3P63215 75 aa18.95■□□□□ 0.62
C9orf3-209ENST00000460573 MED22Q15528 200 aa18.95■□□□□ 0.62
C9orf3-209ENST00000460573 TBCEQ15813 527 aaPredicted RBP18.95■□□□□ 0.62
C9orf3-209ENST00000460573 PRAMEF6Q5VXH4 476 aa18.95■□□□□ 0.62
C9orf3-209ENST00000460573 OR1M1Q8NGA1 313 aa18.95■□□□□ 0.62
C9orf3-209ENST00000460573 HPSE2Q8WWQ2 592 aa18.95■□□□□ 0.62
C9orf3-209ENST00000460573 FGGYQ96C11 551 aa18.95■□□□□ 0.62
C9orf3-209ENST00000460573 BPESC1Q9GZL8 116 aa18.95■□□□□ 0.62
C9orf3-209ENST00000460573 CHST5Q9GZS9 411 aa18.95■□□□□ 0.62
C9orf3-209ENST00000460573 PPP1R3EQ9H7J1 279 aa18.95■□□□□ 0.62
C9orf3-209ENST00000460573 ISYNA1Q9NPH2 558 aa18.95■□□□□ 0.62
C9orf3-209ENST00000460573 TREM2Q9NZC2 230 aa18.95■□□□□ 0.62
C9orf3-209ENST00000460573 DHDHQ9UQ10 334 aa18.95■□□□□ 0.62
C9orf3-209ENST00000460573 HIVEP2P31629 2446 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 GRPP07492 148 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 IRF2P14316 349 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 GPR50Q13585 617 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 MPPED2Q15777 294 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 YIF1BQ5BJH7 314 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 CEP78Q5JTW2 689 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 KCTD8Q6ZWB6 473 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 UTS2BQ765I0 119 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 OR51A4Q8NGJ6 313 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 OR10AC1Q8NH08 325 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 TSEN15Q8WW01 171 aaKnown RBP18.94■□□□□ 0.62
C9orf3-209ENST00000460573 GHSRQ92847 366 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 OR5M11Q96RB7 305 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 TLNRD1Q9H1K6 362 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 GPR173Q9NS66 373 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 UFSP2Q9NUQ7 469 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 SLC7A11Q9UPY5 501 aa18.94■□□□□ 0.62
C9orf3-209ENST00000460573 TANC2Q9HCD6 1990 aa18.93■□□□□ 0.62
C9orf3-209ENST00000460573 A6NIN4 97 aa18.93■□□□□ 0.62
C9orf3-209ENST00000460573 TMEM178BH3BS89 294 aa18.93■□□□□ 0.62
C9orf3-209ENST00000460573 LMX1BO60663 402 aa18.93■□□□□ 0.62
C9orf3-209ENST00000460573 CD2P06729 351 aa18.93■□□□□ 0.62
C9orf3-209ENST00000460573 CELP19835 753 aa18.93■□□□□ 0.62
C9orf3-209ENST00000460573 THBS2P35442 1172 aa18.93■□□□□ 0.62
C9orf3-209ENST00000460573 LOXL1Q08397 574 aaPredicted RBP18.93■□□□□ 0.62
C9orf3-209ENST00000460573 ZNF154Q13106 437 aa18.93■□□□□ 0.62
C9orf3-209ENST00000460573 SERPINA12Q8IW75 414 aa18.93■□□□□ 0.62
C9orf3-209ENST00000460573 SVOPQ8N4V2 548 aa18.93■□□□□ 0.62
C9orf3-209ENST00000460573 ZNF420Q8TAQ5 688 aaPredicted RBP18.93■□□□□ 0.62
C9orf3-209ENST00000460573 ADAT3Q96EY9 351 aaPredicted RBP18.93■□□□□ 0.62
C9orf3-209ENST00000460573 PGLYRP3Q96LB9 341 aa18.93■□□□□ 0.62
C9orf3-209ENST00000460573 RNF7Q9UBF6 113 aa18.93■□□□□ 0.62
C9orf3-209ENST00000460573 NPTNQ9Y639 398 aa18.93■□□□□ 0.62
C9orf3-209ENST00000460573 IGHV3-64DA0A0J9YX35 117 aa18.92■□□□□ 0.62
C9orf3-209ENST00000460573 LRP5LA4QPB2 252 aa18.92■□□□□ 0.62
C9orf3-209ENST00000460573 A6NLC8 198 aa18.92■□□□□ 0.62
C9orf3-209ENST00000460573 ZNF732B4DXR9 585 aa18.92■□□□□ 0.62
C9orf3-209ENST00000460573 FSTL3O95633 263 aa18.92■□□□□ 0.62
C9orf3-209ENST00000460573 USF1P22415 310 aaPredicted RBP18.92■□□□□ 0.62
C9orf3-209ENST00000460573 PMELP40967 661 aa18.92■□□□□ 0.62
C9orf3-209ENST00000460573 GPM6AP51674 278 aa18.92■□□□□ 0.62
C9orf3-209ENST00000460573 CNN3Q15417 329 aaKnown RBP18.92■□□□□ 0.62
C9orf3-209ENST00000460573 KCTD21Q4G0X4 260 aa18.92■□□□□ 0.62
C9orf3-209ENST00000460573 WDR86Q86TI4 376 aa18.92■□□□□ 0.62
C9orf3-209ENST00000460573 PARP16Q8N5Y8 322 aa18.92■□□□□ 0.62
C9orf3-209ENST00000460573 ZFP41Q8N8Y5 198 aa18.92■□□□□ 0.62
C9orf3-209ENST00000460573 OR5D14Q8NGL3 314 aa18.92■□□□□ 0.62
C9orf3-209ENST00000460573 NEK6Q9HC98 313 aa18.92■□□□□ 0.62
C9orf3-209ENST00000460573 C1orf123Q9NWV4 160 aa18.92■□□□□ 0.62
C9orf3-209ENST00000460573 WIPI2Q9Y4P8 454 aa18.92■□□□□ 0.62
C9orf3-209ENST00000460573 DYSFO75923 2080 aa18.91■□□□□ 0.62
C9orf3-209ENST00000460573 A0A096LNT2 108 aa18.91■□□□□ 0.62
C9orf3-209ENST00000460573 OCM2P0CE71 109 aa18.91■□□□□ 0.62
C9orf3-209ENST00000460573 CFHR2P36980 270 aa18.91■□□□□ 0.62
C9orf3-209ENST00000460573 FUT6P51993 359 aa18.91■□□□□ 0.62
C9orf3-209ENST00000460573 CHN2P52757 468 aa18.91■□□□□ 0.62
C9orf3-209ENST00000460573 UBE2V2Q15819 145 aa18.91■□□□□ 0.62
C9orf3-209ENST00000460573 ZNF573Q86YE8 665 aa18.91■□□□□ 0.62
C9orf3-209ENST00000460573 C11orf53Q8IXP5 236 aa18.91■□□□□ 0.62
C9orf3-209ENST00000460573 MS4A15Q8N5U1 240 aa18.91■□□□□ 0.62
C9orf3-209ENST00000460573 RGP1Q92546 391 aaPredicted RBP18.91■□□□□ 0.62
C9orf3-209ENST00000460573 THRSPQ92748 146 aa18.91■□□□□ 0.62
C9orf3-209ENST00000460573 FGF23Q9GZV9 251 aaPredicted RBP18.91■□□□□ 0.62
C9orf3-209ENST00000460573 OR51I2Q9H344 312 aa18.91■□□□□ 0.62
C9orf3-209ENST00000460573 ALX3O95076 343 aa18.9■□□□□ 0.62
C9orf3-209ENST00000460573 PRKACBP22694 351 aa18.9■□□□□ 0.62
C9orf3-209ENST00000460573 MAP2K4P45985 399 aa18.9■□□□□ 0.62
C9orf3-209ENST00000460573 EMX1Q04741 257 aaPredicted RBP18.9■□□□□ 0.62
C9orf3-209ENST00000460573 MLLT11Q13015 90 aaPredicted RBP18.9■□□□□ 0.62
C9orf3-209ENST00000460573 Q499Y3 187 aa18.9■□□□□ 0.62
C9orf3-209ENST00000460573 ZNF367Q7RTV3 350 aa18.9■□□□□ 0.62
C9orf3-209ENST00000460573 SCCPDHQ8NBX0 429 aa18.9■□□□□ 0.62
C9orf3-209ENST00000460573 DNAAF1Q8NEP3 725 aa18.9■□□□□ 0.62
C9orf3-209ENST00000460573 UFD1Q92890 307 aa18.9■□□□□ 0.62
C9orf3-209ENST00000460573 ZCCHC4Q9H5U6 513 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms