RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ANXA8P13928 327 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 RAB4AP20338 218 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 KIR3DL2P43630 455 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 RPS5P46782 204 aaKnown RBP1.92□□□□□ -2.1
RFC4-211ENST00000460408 HCAR3P49019 387 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 P2RX1P51575 399 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 CCL23P55773 120 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 VSX2P58304 361 aaPredicted RBP1.92□□□□□ -2.1
RFC4-211ENST00000460408 KIR2DS1Q14954 304 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 SMUG1Q53HV7 270 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 ANXA8L1Q5VT79 327 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 FBXW9Q5XUX1 488 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 TWF2Q6IBS0 349 aaKnown RBP1.92□□□□□ -2.1
RFC4-211ENST00000460408 CLEC2AQ6UVW9 174 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 DEFB128Q7Z7B8 93 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 PRSS58Q8IYP2 241 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 COX18Q8N8Q8 333 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 OR52E5Q8NH55 327 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 COQ8AQ8NI60 647 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 LRRC29Q8WV35 223 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 PTX4Q96A99 478 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 NRBF2Q96F24 287 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 RNF145Q96MT1 663 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 MTG1Q9BT17 334 aaPredicted RBP1.92□□□□□ -2.1
RFC4-211ENST00000460408 SAMD10Q9BYL1 202 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 SLC7A5P2Q9GIP4 190 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 OR52D1Q9H346 318 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 ELOVL6Q9H5J4 265 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 BEX1Q9HBH7 125 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 DDX19AQ9NUU7 478 aaKnown RBP1.92□□□□□ -2.1
RFC4-211ENST00000460408 RCL1Q9Y2P8 373 aaKnown RBP1.92□□□□□ -2.1
RFC4-211ENST00000460408 PHLPP2Q6ZVD8 1323 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 ZFHX3Q15911 3703 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 IGHV1OR15-9A0A0B4J2B8 117 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 A0A0J9YXV3 536 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 COLCA2A8K830 154 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 H7C1H1 209 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 NVLO15381 856 aaKnown RBP1.91□□□□□ -2.1
RFC4-211ENST00000460408 VAMP5O95183 116 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 FGFR1OPO95684 399 aaKnown RBP1.91□□□□□ -2.1
RFC4-211ENST00000460408 HLA-HP01893 362 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 CLTAP09496 248 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 CSNK2A2P19784 350 aaPredicted RBP1.91□□□□□ -2.1
RFC4-211ENST00000460408 GSTM3P21266 225 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 DTYMKP23919 212 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 HMOX2P30519 316 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 TNFSF9P41273 254 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 ATP5OP48047 213 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 ZNF121P58317 390 aaPredicted RBP1.91□□□□□ -2.1
RFC4-211ENST00000460408 RPS23P62266 143 aaKnown RBP1.91□□□□□ -2.1
RFC4-211ENST00000460408 FKBP1AP62942 108 aaKnown RBP1.91□□□□□ -2.1
RFC4-211ENST00000460408 IRF8Q02556 426 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 IL18Q14116 193 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 TPTE2P1Q5T6R2 138 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 FKBP1CQ5VVH2 108 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 SAXO2Q658L1 398 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 STUMQ69YW2 141 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 BHLHA15Q7RTS1 189 aaPredicted RBP1.91□□□□□ -2.1
RFC4-211ENST00000460408 SLC16A13Q7RTY0 426 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 MRPL55Q7Z7F7 128 aaKnown RBP1.91□□□□□ -2.1
RFC4-211ENST00000460408 CALHM1Q8IU99 346 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 FAM71AQ8IYT1 594 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 LGI3Q8N145 548 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 JAGN1Q8N5M9 183 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 C8orf31Q8N9H6 132 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 BPIFCQ8NFQ6 507 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 OR4K5Q8NGD3 323 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 RGP1Q92546 391 aaPredicted RBP1.91□□□□□ -2.1
RFC4-211ENST00000460408 FLYWCH2Q96CP2 140 aaKnown RBP1.91□□□□□ -2.1
RFC4-211ENST00000460408 RBMXL1Q96E39 390 aaKnown RBP1.91□□□□□ -2.1
RFC4-211ENST00000460408 ZNF317Q96PQ6 595 aaPredicted RBP1.91□□□□□ -2.1
RFC4-211ENST00000460408 ZNF382Q96SR6 550 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 TDRD3Q9H7E2 651 aaKnown RBP1.91□□□□□ -2.1
RFC4-211ENST00000460408 EDA2RQ9HAV5 297 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 WFDC1Q9HC57 220 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 LYRM4Q9HD34 91 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 CCNB1IP1Q9NPC3 277 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 COL11A1P12107 1806 aaPredicted RBP1.91□□□□□ -2.1
RFC4-211ENST00000460408 ARAP2Q8WZ64 1704 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 FN1P02751 2386 aaKnown RBP1.91□□□□□ -2.1
RFC4-211ENST00000460408 COL6A6A6NMZ7 2263 aa1.91□□□□□ -2.1
RFC4-211ENST00000460408 COL4A1P02462 1669 aa1.9□□□□□ -2.1
RFC4-211ENST00000460408 LAMA5O15230 3695 aa1.9□□□□□ -2.11
RFC4-211ENST00000460408 SPTBN1Q01082 2364 aaKnown RBP1.9□□□□□ -2.11
RFC4-211ENST00000460408 SIP14410 1827 aa1.9□□□□□ -2.11
RFC4-211ENST00000460408 NUP98P52948 1817 aa1.9□□□□□ -2.11
RFC4-211ENST00000460408 OR6C74A6NCV1 312 aa1.9□□□□□ -2.11
RFC4-211ENST00000460408 H0YJW9 148 aa1.9□□□□□ -2.11
RFC4-211ENST00000460408 H7C0C1 242 aa1.9□□□□□ -2.11
RFC4-211ENST00000460408 M0R3G1 203 aa1.9□□□□□ -2.11
RFC4-211ENST00000460408 PLPP1O14494 284 aa1.9□□□□□ -2.11
RFC4-211ENST00000460408 ERI3O43414 337 aaKnown RBP1.9□□□□□ -2.11
RFC4-211ENST00000460408 REM1O75628 298 aa1.9□□□□□ -2.11
RFC4-211ENST00000460408 FCN3O75636 299 aa1.9□□□□□ -2.11
RFC4-211ENST00000460408 CCNKO75909 580 aa1.9□□□□□ -2.11
RFC4-211ENST00000460408 SEMA3DO95025 777 aa1.9□□□□□ -2.11
RFC4-211ENST00000460408 MPZL1O95297 269 aa1.9□□□□□ -2.11
RFC4-211ENST00000460408 LSM8O95777 96 aaKnown RBP1.9□□□□□ -2.11
RFC4-211ENST00000460408 OR8U9P0C7N5 309 aa1.9□□□□□ -2.11
RFC4-211ENST00000460408 OR56A5P0C7T3 313 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms