RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 BBS1Q8NFJ9 593 aa8.28□□□□□ -1.08
HDLBP-228ENST00000459788 FAM81AQ8TBF8 368 aa8.28□□□□□ -1.08
HDLBP-228ENST00000459788 RNF170Q96K19 258 aa8.28□□□□□ -1.08
HDLBP-228ENST00000459788 LYZL4Q96KX0 146 aa8.28□□□□□ -1.08
HDLBP-228ENST00000459788 TBX15Q96SF7 602 aa8.28□□□□□ -1.08
HDLBP-228ENST00000459788 PBOV1Q9GZY1 135 aa8.28□□□□□ -1.08
HDLBP-228ENST00000459788 ZNF696Q9H7X3 374 aa8.28□□□□□ -1.08
HDLBP-228ENST00000459788 UNKLQ9H9P5 680 aaKnown RBP8.28□□□□□ -1.08
HDLBP-228ENST00000459788 SMURF1Q9HCE7 757 aa8.28□□□□□ -1.08
HDLBP-228ENST00000459788 BRD7Q9NPI1 651 aa8.28□□□□□ -1.08
HDLBP-228ENST00000459788 CLN6Q9NWW5 311 aa8.28□□□□□ -1.08
HDLBP-228ENST00000459788 WARS2Q9UGM6 360 aaKnown RBP8.28□□□□□ -1.08
HDLBP-228ENST00000459788 KLHDC2Q9Y2U9 406 aa8.28□□□□□ -1.08
HDLBP-228ENST00000459788 CAB39Q9Y376 341 aaPredicted RBP8.28□□□□□ -1.08
HDLBP-228ENST00000459788 TRBV23-1A0A0A0MS06 115 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 IGHV1-69DA0A0B4J2H0 117 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 CENPVL3A0A0U1RRI6 287 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 DHRS3O75911 302 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 IGHV1-69P01742 117 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 EGR1P18146 543 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 RBMXP38159 391 aaKnown RBP8.27□□□□□ -1.09
HDLBP-228ENST00000459788 CSNK2BP67870 215 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 GFOD2Q3B7J2 385 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 ZNF322Q6U7Q0 402 aaPredicted RBP8.27□□□□□ -1.09
HDLBP-228ENST00000459788 THAP5Q7Z6K1 395 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 LDLRAD3Q86YD5 345 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 C10orf67Q8IYJ2 551 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 C19orf18Q8NEA5 215 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 ANGPTL6Q8NI99 470 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 TBC1D15Q8TC07 691 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 SSMEM1Q8WWF3 244 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 TRUB1Q8WWH5 349 aaKnown RBP8.27□□□□□ -1.09
HDLBP-228ENST00000459788 HPSE2Q8WWQ2 592 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 PIGCQ92535 297 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 ZDHHC16Q969W1 377 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 CENPNQ96H22 339 aaPredicted RBP8.27□□□□□ -1.09
HDLBP-228ENST00000459788 PCGF1Q9BSM1 259 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 DCTN5Q9BTE1 182 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 OR51I2Q9H344 312 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 ACOXLQ9NUZ1 547 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 DNAJB11Q9UBS4 358 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 ENPP5Q9UJA9 477 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.27□□□□□ -1.09
HDLBP-228ENST00000459788 SNX5Q9Y5X3 404 aa8.27□□□□□ -1.09
HDLBP-228ENST00000459788 ZNF670-ZNF695F2Z2N8 137 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 M0R1W7 72 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 DLGAP1O14490 977 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 SIGLEC5O15389 551 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 PRKYO43930 277 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 NOS1APO75052 506 aaPredicted RBP8.26□□□□□ -1.09
HDLBP-228ENST00000459788 SRSF10O75494 262 aaKnown RBP8.26□□□□□ -1.09
HDLBP-228ENST00000459788 SULT1C4O75897 302 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 NDUFA7O95182 113 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 OR2T7P0C7T2 308 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 CCL1P22362 96 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 DEFB112Q30KQ8 113 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 PRR31Q5SQ13 230 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 C1orf146Q5VVC0 180 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 NCR3LG1Q68D85 454 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 TMEM42Q69YG0 159 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 ZNF573Q86YE8 665 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 EGFL6Q8IUX8 553 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 SLC35F2Q8IXU6 374 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 ELMOD2Q8IZ81 293 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 TCEANCQ8N8B7 351 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 OR8J1Q8NGP2 316 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 OR2T27Q8NH04 317 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 LRTOMTQ8WZ04 291 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 ST8SIA4Q92187 359 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 DYRK2Q92630 601 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 RFKQ969G6 155 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 C10orf35Q96D05 121 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 SDSLQ96GA7 329 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 CCL13Q99616 98 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 GABARAPL3Q9BY60 117 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 ADGRL4Q9HBW9 690 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 GPR84Q9NQS5 396 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 NLKQ9UBE8 527 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 IKZF2Q9UKS7 526 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 POLDIP2Q9Y2S7 368 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 R4GMQ9 66 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 V9GYS6 101 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 TRRAPQ9Y4A5 3859 aa8.26□□□□□ -1.09
HDLBP-228ENST00000459788 A0A1W2PPH5 198 aa8.25□□□□□ -1.09
HDLBP-228ENST00000459788 OR2AT4A6NND4 320 aa8.25□□□□□ -1.09
HDLBP-228ENST00000459788 ZNF732B4DXR9 585 aa8.25□□□□□ -1.09
HDLBP-228ENST00000459788 LOC110117498-PIK3R3F6TDL0 507 aa8.25□□□□□ -1.09
HDLBP-228ENST00000459788 HOXA3O43365 443 aaPredicted RBP8.25□□□□□ -1.09
HDLBP-228ENST00000459788 FCN3O75636 299 aa8.25□□□□□ -1.09
HDLBP-228ENST00000459788 CIB2O75838 187 aa8.25□□□□□ -1.09
HDLBP-228ENST00000459788 TTRP02766 147 aa8.25□□□□□ -1.09
HDLBP-228ENST00000459788 CRYBA1P05813 215 aa8.25□□□□□ -1.09
HDLBP-228ENST00000459788 SFTPBP07988 381 aa8.25□□□□□ -1.09
HDLBP-228ENST00000459788 MELTFP08582 738 aa8.25□□□□□ -1.09
HDLBP-228ENST00000459788 GLRA1P23415 457 aa8.25□□□□□ -1.09
HDLBP-228ENST00000459788 HTR1FP30939 366 aa8.25□□□□□ -1.09
HDLBP-228ENST00000459788 GPM6AP51674 278 aa8.25□□□□□ -1.09
HDLBP-228ENST00000459788 CXCR4P61073 352 aa8.25□□□□□ -1.09
HDLBP-228ENST00000459788 ARF6P62330 175 aa8.25□□□□□ -1.09
HDLBP-228ENST00000459788 BLMHQ13867 455 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms