RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 ELMOD2Q8IZ81 293 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 SIGLECL1Q8N7X8 197 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 PNLDC1Q8NA58 520 aaKnown RBP13.38□□□□□ -0.27
COL7A1-203ENST00000459756 OR2T27Q8NH04 317 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 TRUB1Q8WWH5 349 aaKnown RBP13.38□□□□□ -0.27
COL7A1-203ENST00000459756 RPL3LQ92901 407 aaKnown RBP13.38□□□□□ -0.27
COL7A1-203ENST00000459756 SLC29A1Q99808 456 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 FGF23Q9GZV9 251 aaPredicted RBP13.38□□□□□ -0.27
COL7A1-203ENST00000459756 MS4A7Q9GZW8 240 aaPredicted RBP13.38□□□□□ -0.27
COL7A1-203ENST00000459756 IMPAD1Q9NX62 359 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 USE1Q9NZ43 259 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 MRM2Q9UI43 246 aaKnown RBP13.38□□□□□ -0.27
COL7A1-203ENST00000459756 GTF2A1LQ9UNN4 478 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 SNX5Q9Y5X3 404 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 FBN3Q75N90 2809 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 OR5B21A6NL26 309 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 MAGEB4O15481 346 aaPredicted RBP13.37□□□□□ -0.27
COL7A1-203ENST00000459756 DHRS3O75911 302 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 PLATP00750 562 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 KRT8P05787 483 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 ATP6V1E1P36543 226 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 GPM6AP51674 278 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 FGF12P61328 243 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 ACTG1P63261 375 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 WDR38Q5JTN6 314 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 BCL6BQ8N143 479 aaPredicted RBP13.37□□□□□ -0.27
COL7A1-203ENST00000459756 ZDHHC22Q8N966 263 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 OR5A2Q8NGI9 324 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 PPP1R14AQ96A00 147 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 RASSF4Q9H2L5 321 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 OR51I2Q9H344 312 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 ESM1Q9NQ30 184 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 ENPP5Q9UJA9 477 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 OR52A1Q9UKL2 312 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 PIGLQ9Y2B2 252 aa13.37□□□□□ -0.27
COL7A1-203ENST00000459756 IGHV3OR16-10A0A075B7F0 116 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 TRAV40A0A0B4J280 105 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 A0A1W2PQL4 384 aaPredicted RBP13.36□□□□□ -0.27
COL7A1-203ENST00000459756 ZNF879B4DU55 563 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 ZNF732B4DXR9 585 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 FAHP16930 419 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 PEX2P28328 305 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 MTNR1AP48039 350 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 BPIFB3P59826 476 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 CEP78Q5JTW2 689 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 ATPAF1Q5TC12 328 aaPredicted RBP13.36□□□□□ -0.27
COL7A1-203ENST00000459756 PLEKHG7Q6ZR37 379 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 BTN2A1Q7KYR7 527 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 SSX6Q7RTT6 188 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 YIPF7Q8N8F6 280 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 OR10H4Q8NGA5 316 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 HRASLS5Q96KN8 279 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 TBX5Q99593 518 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 CCL13Q99616 98 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 DNTTIP1Q9H147 329 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 ZMAT3Q9HA38 289 aaKnown RBP13.36□□□□□ -0.27
COL7A1-203ENST00000459756 DNAJB11Q9UBS4 358 aa13.36□□□□□ -0.27
COL7A1-203ENST00000459756 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL7A1-203ENST00000459756 METTL15A6NJ78 407 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 DHRS7CA6NNS2 312 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 P2RY10O00398 339 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 GPR37O15354 613 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 FCN3O75636 299 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 SULT1C4O75897 302 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 TOX4O94842 621 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 RPP14O95059 124 aaKnown RBP13.35□□□□□ -0.27
COL7A1-203ENST00000459756 NRASP01111 189 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 UBA52P62987 128 aaKnown RBP13.35□□□□□ -0.27
COL7A1-203ENST00000459756 SLC25A30Q5SVS4 291 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 ZNF684Q5T5D7 378 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 GPR157Q5UAW9 335 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 PLCXD3Q63HM9 321 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 STUMQ69YW2 141 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 MOB3CQ70IA8 216 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 ZNF671Q8TAW3 534 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 ST8SIA4Q92187 359 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 SEH1LQ96EE3 360 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 MBOAT4Q96T53 435 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 PCGF1Q9BSM1 259 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 WDR13Q9H1Z4 485 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 NKX1-2Q9UD57 310 aaPredicted RBP13.35□□□□□ -0.27
COL7A1-203ENST00000459756 V9GYS6 101 aa13.35□□□□□ -0.27
COL7A1-203ENST00000459756 A0A1B0GTI1 187 aa13.34□□□□□ -0.27
COL7A1-203ENST00000459756 NKX6-3A6NJ46 265 aa13.34□□□□□ -0.27
COL7A1-203ENST00000459756 DLGAP1O14490 977 aa13.34□□□□□ -0.27
COL7A1-203ENST00000459756 AKR7A2O43488 359 aa13.34□□□□□ -0.27
COL7A1-203ENST00000459756 NDUFB3O43676 98 aa13.34□□□□□ -0.27
COL7A1-203ENST00000459756 APOL3O95236 402 aa13.34□□□□□ -0.27
COL7A1-203ENST00000459756 TGM4P49221 684 aa13.34□□□□□ -0.27
COL7A1-203ENST00000459756 GMFBP60983 142 aa13.34□□□□□ -0.27
COL7A1-203ENST00000459756 SNRPGP62308 76 aaKnown RBP13.34□□□□□ -0.27
COL7A1-203ENST00000459756 BAMBIQ13145 260 aa13.34□□□□□ -0.27
COL7A1-203ENST00000459756 LRRC10Q5BKY1 277 aa13.34□□□□□ -0.27
COL7A1-203ENST00000459756 CLVS2Q5SYC1 327 aa13.34□□□□□ -0.27
COL7A1-203ENST00000459756 METTL11BQ5VVY1 283 aa13.34□□□□□ -0.27
COL7A1-203ENST00000459756 MEDAGQ5VYS4 303 aa13.34□□□□□ -0.27
COL7A1-203ENST00000459756 TMEM42Q69YG0 159 aa13.34□□□□□ -0.27
COL7A1-203ENST00000459756 C12orf54Q6X4T0 127 aa13.34□□□□□ -0.27
COL7A1-203ENST00000459756 Q6ZSR3 168 aa13.34□□□□□ -0.27
COL7A1-203ENST00000459756 CATSPERDQ86XM0 798 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms