RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 ZNF79Q15937 498 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 TIMM23BQ5SRD1 257 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 TMEM69Q5SWH9 247 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 AWAT2Q6E213 333 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 FAM166AQ6J272 317 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 LHFPL2Q6ZUX7 228 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 OR2W3Q7Z3T1 314 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 LYSMD2Q8IV50 215 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 ZNF295-AS1Q8N0V1 137 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 OR51A2Q8NGJ7 313 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 OR5H6Q8NGV6 325 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 OR2AE1Q8NHA4 323 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 CHPT1Q8WUD6 406 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 RND1Q92730 232 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 PIGTQ969N2 578 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 SOSTQ9BQB4 213 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 VKORC1Q9BQB6 163 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 CST11Q9H112 138 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 OR10A4Q9H209 315 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 PPP1R3EQ9H7J1 279 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 PCDHB16Q9NRJ7 776 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 FBLN5Q9UBX5 448 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 CGGBP1Q9UFW8 167 aaPredicted RBP7.73□□□□□ -1.17
VPS50-207ENST00000458530 RAB22AQ9UL26 194 aa7.73□□□□□ -1.17
VPS50-207ENST00000458530 MRPS28Q9Y2Q9 187 aaKnown RBP7.73□□□□□ -1.17
VPS50-207ENST00000458530 NOP16Q9Y3C1 178 aaKnown RBP7.73□□□□□ -1.17
VPS50-207ENST00000458530 HEATR1Q9H583 2144 aaKnown RBP7.73□□□□□ -1.17
VPS50-207ENST00000458530 RTTNQ86VV8 2226 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 A0A0B4J203 849 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 ZNF503-AS2A6NEH8 195 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 ANKRD30BLA7E2S9 258 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 EEF1E1-BLOC1S5C9J1V9 151 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 EEF1E1O43324 174 aaKnown RBP7.72□□□□□ -1.17
VPS50-207ENST00000458530 TOXO94900 526 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 NRASP01111 189 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 IGKV3-15P01624 115 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 HLA-DQB1P01920 261 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 IL7P13232 177 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 HOXB4P17483 251 aaPredicted RBP7.72□□□□□ -1.17
VPS50-207ENST00000458530 IDH3GP51553 393 aaPredicted RBP7.72□□□□□ -1.17
VPS50-207ENST00000458530 ATP1B3P54709 279 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 CLDN12P56749 244 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 AP3S2P59780 193 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 FAM3AP98173 230 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 ZNF92Q03936 586 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 PMPCAQ10713 525 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 GPR176Q14439 515 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 C2orf76Q3KRA6 126 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 STEAP3Q658P3 488 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 ASPHD2Q6ICH7 369 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 MZT2BQ6NZ67 158 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 ZNF584Q8IVC4 421 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 ZNF101Q8IZC7 436 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 CMTM4Q8IZR5 234 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 OR5AS1Q8N127 324 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 POC5Q8NA72 575 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 OR51D1Q8NGF3 324 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 OR52N4Q8NGI2 321 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 KCNG3Q8TAE7 436 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 ITLN2Q8WWU7 325 aaPredicted RBP7.72□□□□□ -1.17
VPS50-207ENST00000458530 RFT1Q96AA3 541 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 SLC25A38Q96DW6 304 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 BORCS8Q96FH0 119 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 LRRC46Q96FV0 321 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 URM1Q9BTM9 101 aaKnown RBP7.72□□□□□ -1.17
VPS50-207ENST00000458530 NOX3Q9HBY0 568 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 SPEF1Q9Y4P9 236 aa7.72□□□□□ -1.17
VPS50-207ENST00000458530 ZNF469Q96JG9 3925 aaPredicted RBP7.71□□□□□ -1.17
VPS50-207ENST00000458530 A0A0G2JMP0 313 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 A0A0X1KG70 313 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 TMEM272A0A1B0GTI8 110 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 A0A1B0GUH1 482 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 CENPXA8MT69 81 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 XRCC3O43542 346 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 GSTZ1O43708 216 aaPredicted RBP7.71□□□□□ -1.18
VPS50-207ENST00000458530 ZNF780AO75290 641 aaPredicted RBP7.71□□□□□ -1.18
VPS50-207ENST00000458530 ECDO95905 644 aaPredicted RBP7.71□□□□□ -1.18
VPS50-207ENST00000458530 CST4P01036 141 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 GSTT2BP0CG30 244 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 BMP5P22003 454 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 RAD52P43351 418 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 ALDH3B1P43353 468 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 RBP2P50120 134 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 MMP15P51511 669 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 FUT6P51993 359 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 PPP1CBP62140 327 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 ASAH1Q13510 395 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 ARL6IP1Q15041 203 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 KISS1Q15726 138 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 PLCXD3Q63HM9 321 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 TMEM42Q69YG0 159 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 ZDHHC23Q8IYP9 409 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 WDR31Q8NA23 367 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 ACBD4Q8NC06 268 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 NAXEQ8NCW5 288 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 OR4M2Q8NGB6 313 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 OR56B2PQ8NGI1 322 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 DEDD2Q8WXF8 326 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 FAM46BQ96A09 425 aa7.71□□□□□ -1.18
VPS50-207ENST00000458530 SLC25A28Q96A46 364 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms