RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 OR11G2Q8NGC1 345 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 NRXN3Q9Y4C0 1643 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 GATCO43716 136 aaKnown RBP17.63■□□□□ 0.41
SNX27-204ENST00000458013 SLC25A5P05141 298 aaKnown RBP17.63■□□□□ 0.41
SNX27-204ENST00000458013 HLA-BQ31612 363 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 ZNF680Q8NEM1 530 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 M1APQ8TC57 530 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 VN1R1Q9GZP7 353 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 PSG11Q9UQ72 335 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 CELA2BP08218 269 aaPredicted RBP17.62■□□□□ 0.41
SNX27-204ENST00000458013 HTN1P15515 57 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 RAB1AP62820 205 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 FAM3AP98173 230 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 DND1Q8IYX4 353 aaKnown RBP17.62■□□□□ 0.41
SNX27-204ENST00000458013 OR1L4Q8NGR5 311 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 MRGPRX4Q96LA9 322 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 ECM29Q5VYK3 1845 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 ZNF117Q03924 483 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 NKG7Q16617 165 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 PELI1Q96FA3 418 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 DDX60LQ5H9U9 1706 aaKnown RBP17.62■□□□□ 0.41
SNX27-204ENST00000458013 TRGV10A0A0A0MS01 117 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 CNN1P51911 297 aaKnown RBP17.62■□□□□ 0.41
SNX27-204ENST00000458013 DHODHQ02127 395 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 CAMKMTQ7Z624 323 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 C3orf80F5H4A9 247 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 KLK10O43240 276 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 CCL17Q92583 94 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 CORO2AQ92828 525 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 GPR87Q9BY21 358 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 ZMAT5Q9UDW3 170 aaKnown RBP17.62■□□□□ 0.41
SNX27-204ENST00000458013 ABCD3P28288 659 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 ZNF774Q6NX45 483 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 BAP18Q8IXM2 172 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 FOXB1Q99853 325 aa17.62■□□□□ 0.41
SNX27-204ENST00000458013 A0A1B0GUH1 482 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 FAM157AC9JC47 383 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 RNASEK-C17orf49H0YIS7 233 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 OR6S1Q8NH40 331 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 AKIP1Q9NQ31 210 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 LYZL6O75951 148 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 CD1EP15812 388 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 TOMM20LQ6UXN7 152 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 KIAA1324LA8MWY0 1029 aaPredicted RBP17.61■□□□□ 0.41
SNX27-204ENST00000458013 IL5P05113 134 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 ST3GAL2Q16842 350 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 LYG1Q8N1E2 194 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 FBXL14Q8N1E6 418 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 ST8SIA1Q92185 356 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 A0A1W2PPC4 97 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 ALG1L2C9J202 215 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 CYR61O00622 381 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 OR2A1Q8NGT9 310 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 ASPDHA6ND91 283 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 PPIHO43447 177 aaKnown RBP17.61■□□□□ 0.41
SNX27-204ENST00000458013 ERVS71-1P61550 626 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 ETFDHQ16134 617 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 Q3ZCU0 254 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 ZNF485Q8NCK3 441 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 POM121L2Q96KW2 1035 aa17.61■□□□□ 0.41
SNX27-204ENST00000458013 LSM2Q9Y333 95 aaKnown RBP17.61■□□□□ 0.41
SNX27-204ENST00000458013 DHHO43323 396 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 HPP00738 406 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 FUT6P51993 359 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 WDR38Q5JTN6 314 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 FA2HQ7L5A8 372 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 TGIF2LYQ8IUE0 185 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 SFTPA1Q8IWL2 248 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 OR1F12Q8NHA8 337 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 SERGEFQ9UGK8 458 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 R4GN57 208 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 GSG1Q2KHT4 349 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 C11orf87Q6NUJ2 197 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 TMEM229BQ8NBD8 167 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 SARAFQ96BY9 339 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 SLC25A22Q9H936 323 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 NDUFB3O43676 98 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 PPP1CAP62136 330 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 PPP1CBP62140 327 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 TEX261Q6UWH6 196 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 U3KQ87 197 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 TRAV20A0A0B4J274 112 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 XKRY2A2RUG3 117 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 MEOX1P50221 254 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 DSCR4P56555 118 aaPredicted RBP17.6■□□□□ 0.41
SNX27-204ENST00000458013 SPEM2Q0P670 501 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 FAHD1Q6P587 224 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 HGDQ93099 445 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 SMIM21Q3B7S5 101 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 GVQW1Q8N7I0 195 aa17.6■□□□□ 0.41
SNX27-204ENST00000458013 ZNHIT1O43257 154 aa17.59■□□□□ 0.41
SNX27-204ENST00000458013 VAMP5O95183 116 aa17.59■□□□□ 0.41
SNX27-204ENST00000458013 MMP7P09237 267 aaPredicted RBP17.59■□□□□ 0.41
SNX27-204ENST00000458013 HNRNPA3P51991 378 aaKnown RBP17.59■□□□□ 0.41
SNX27-204ENST00000458013 TPPP2P59282 170 aa17.59■□□□□ 0.41
SNX27-204ENST00000458013 LRRC10Q5BKY1 277 aa17.59■□□□□ 0.41
SNX27-204ENST00000458013 HES4Q9HCC6 221 aa17.59■□□□□ 0.41
SNX27-204ENST00000458013 ZNF71Q9NQZ8 489 aaPredicted RBP17.59■□□□□ 0.41
SNX27-204ENST00000458013 IGKV3-7A0A075B6H7 116 aa17.59■□□□□ 0.41
SNX27-204ENST00000458013 CBR3O75828 277 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms