RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 C11orf87Q6NUJ2 197 aa16.1■□□□□ 0.17
SEMA3B-209ENST00000456560 TMEM17Q86X19 198 aa16.1■□□□□ 0.17
SEMA3B-209ENST00000456560 KCNRGQ8N5I3 272 aa16.1■□□□□ 0.17
SEMA3B-209ENST00000456560 CCDC54Q8NEL0 328 aa16.1■□□□□ 0.17
SEMA3B-209ENST00000456560 BPIFCQ8NFQ6 507 aa16.1■□□□□ 0.17
SEMA3B-209ENST00000456560 SEC22AQ96IW7 307 aa16.1■□□□□ 0.17
SEMA3B-209ENST00000456560 CHST5Q9GZS9 411 aa16.1■□□□□ 0.17
SEMA3B-209ENST00000456560 PCDHGA1Q9Y5H4 931 aa16.1■□□□□ 0.17
SEMA3B-209ENST00000456560 COL27A1Q8IZC6 1860 aaPredicted RBP16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 FAM74A7A6NL05 159 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 M0R135 149 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 DUS4LO95620 317 aaKnown RBP16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 GP1BAP07359 652 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 DBHP09172 617 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 FAHP16930 419 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 AKR1C4P17516 323 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 CBX5P45973 191 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 ARHGDIBP52566 201 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 FAM74A3Q4VXF1 159 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 ARRDC1Q8N5I2 433 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 KCNE4Q8WWG9 221 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 C10orf35Q96D05 121 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 ZNF799Q96GE5 643 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 PDCD10Q9BUL8 212 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 SDK2Q58EX2 2172 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 DBX1A6NMT0 343 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 NTF4P34130 210 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 LUMP51884 338 aaPredicted RBP16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 TAS2R31P59538 309 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 RPS18P62269 152 aaKnown RBP16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 SLC16A14Q7RTX9 510 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 YRDCQ86U90 279 aaKnown RBP16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 OR51T1Q8NGJ9 327 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 NARS2Q96I59 477 aaKnown RBP16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 BARX1Q9HBU1 254 aaPredicted RBP16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 PLEK2Q9NYT0 353 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 COMMD9Q9P000 198 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 GPR132Q9UNW8 380 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 PIGLQ9Y2B2 252 aa16.09■□□□□ 0.17
SEMA3B-209ENST00000456560 MPTX1A8MV57 137 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 STMND1H3BQB6 276 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 P04436 131 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 CRYGSP22914 178 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 ACP1P24666 158 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 ZNF345Q14585 488 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 H3F3CQ6NXT2 135 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 JMJD6Q6NYC1 403 aaPredicted RBP16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 MOB3CQ70IA8 216 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 GGNQ86UU5 652 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 OR5D18Q8NGL1 313 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 NPRL2Q8WTW4 380 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 PPP1R1CQ8WVI7 109 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 SPTSSAQ969W0 71 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 SGK3Q96BR1 496 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 VRK1Q99986 396 aaPredicted RBP16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 TM2D1Q9BX74 207 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 NKX6-2Q9C056 277 aaPredicted RBP16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 WDR13Q9H1Z4 485 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 TCFL5Q9UL49 500 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 R4GN57 208 aa16.08■□□□□ 0.16
SEMA3B-209ENST00000456560 OR2F2O95006 317 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 CNR1P21554 472 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 VAMP1P23763 118 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 ATP1B3P54709 279 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 OR2F1Q13607 317 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 LRRC37A5PQ49AS3 106 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 DCAF12Q5T6F0 453 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 TMEM185AQ8NFB2 350 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 CASTOR1Q8WTX7 329 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 HAS2Q92819 552 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 ZNF775Q96BV0 537 aaPredicted RBP16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 PADI1Q9ULC6 663 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 LRRC3CA6NJW4 275 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 ZNF716A6NP11 495 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 BCL2L11O43521 198 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 MTRF1O75570 445 aaKnown RBP16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 FCGR2AP12318 317 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 OTX2P32243 289 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 ZNF75AQ96N20 296 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 ZNF471Q9BX82 626 aaPredicted RBP16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 PECRQ9BY49 303 aa16.07■□□□□ 0.16
SEMA3B-209ENST00000456560 RNF222A6NCQ9 220 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 PCP4L1A6NKN8 68 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 RFPL3SP0C7P2 107 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 CARD18P57730 90 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 ARFRP1Q13795 201 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 RAB35Q15286 201 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 RSPO4Q2I0M5 234 aaPredicted RBP16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 SNAI3Q3KNW1 292 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 BEX5Q5H9J7 111 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 PDSS1Q5T2R2 415 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 KCTD9Q7L273 389 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 LHFPL1Q86WI0 220 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 LINC00518Q8N0U6 118 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 GPR137CQ8N3F9 429 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 OR5T2Q8NGG2 359 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 OR5H2Q8NGV7 314 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 OR14L1PQ8NHC6 308 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 TMEM230Q96A57 120 aa16.06■□□□□ 0.16
SEMA3B-209ENST00000456560 C5orf66Q9H5L9 145 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms