RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 SLC31A2O15432 143 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 ZNF205O95201 554 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 TRGC2P03986 189 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 GLI4P10075 376 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 LMO1P25800 156 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 CHATP28329 748 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 IGLV3-21P80748 117 aaPredicted RBP9.09□□□□□ -0.95
CLIP4-208ENST00000456385 NHLH2Q02577 135 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 HAGHQ16775 308 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 SP6Q3SY56 376 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 TMEM182Q6ZP80 229 aaPredicted RBP9.09□□□□□ -0.95
CLIP4-208ENST00000456385 NUP54Q7Z3B4 507 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 REC114Q7Z4M0 266 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 COMMD2Q86X83 199 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 RNF133Q8WVZ7 376 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 EMG1Q92979 244 aaKnown RBP9.09□□□□□ -0.95
CLIP4-208ENST00000456385 RAB39BQ96DA2 213 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 GAL3ST4Q96RP7 486 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 ABHD14AQ9BUJ0 271 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.09□□□□□ -0.95
CLIP4-208ENST00000456385 SDHAF3Q9NRP4 125 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 CFAP54Q96N23 3096 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 A0A087X0M5 115 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 A0A1B0GX30 115 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 H0YL77 283 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 H3BQ15 152 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 FABP4P15090 132 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 FCARP24071 287 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 TAGLN2P37802 199 aaKnown RBP9.09□□□□□ -0.95
CLIP4-208ENST00000456385 C1QL2Q7Z5L3 287 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 OR5AS1Q8N127 324 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 HIST3H2BBQ8N257 126 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 OR10S1Q8NGN2 331 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 KCNG3Q8TAE7 436 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 RHBDD1Q8TEB9 315 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 HPSE2Q8WWQ2 592 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 DAZLQ92904 295 aaKnown RBP9.09□□□□□ -0.95
CLIP4-208ENST00000456385 SLAMF6Q96DU3 332 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 REEP6Q96HR9 211 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 S100A13Q99584 98 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 GINS3Q9BRX5 216 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 PBDC1Q9BVG4 233 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 OR8D2Q9GZM6 311 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 PNO1Q9NRX1 252 aaKnown RBP9.09□□□□□ -0.95
CLIP4-208ENST00000456385 MED29Q9NX70 200 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 PPP4R1LQ9P1A2 415 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 FBLN5Q9UBX5 448 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 PRODH2Q9UF12 536 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 TBX21Q9UL17 535 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 C14orf166Q9Y224 244 aaKnown RBP9.09□□□□□ -0.95
CLIP4-208ENST00000456385 TMED7-TICAM2A0A0A6YYA0 188 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 SEC14L6B5MCN3 397 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 BCAT2O15382 392 aaPredicted RBP9.08□□□□□ -0.96
CLIP4-208ENST00000456385 CYB5BO43169 146 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 MT-ATP6P00846 226 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 HEXBP07686 556 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 HCKP08631 526 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 ZNF20P17024 532 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 P2RY1P47900 373 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 SLC37A1P57057 533 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 SLC26A5P58743 744 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 TAS2R60P59551 318 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 CHRFAM7AQ494W8 412 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 TMEM31Q5JXX7 168 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 ZNF776Q68DI1 518 aaPredicted RBP9.08□□□□□ -0.96
CLIP4-208ENST00000456385 PTPMT1Q8WUK0 201 aaPredicted RBP9.08□□□□□ -0.96
CLIP4-208ENST00000456385 MISP3Q96FF7 219 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 BMFQ96LC9 184 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 WDR92Q96MX6 357 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 SUCNR1Q9BXA5 334 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 NELFAQ9H3P2 528 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 ZNF319Q9P2F9 582 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 BTBD17A6NE02 478 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 ARGFXA6NJG6 315 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 PPP1R2P9O14990 202 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 FKTNO75072 461 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 NPIPB7O75200 414 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 CELA2BP08218 269 aaPredicted RBP9.08□□□□□ -0.96
CLIP4-208ENST00000456385 HNRNPA1P09651 372 aaKnown RBP eCLIP9.08□□□□□ -0.96
CLIP4-208ENST00000456385 NFATC4Q14934 902 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 UBE2V2Q15819 145 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 ZNF542PQ5EBM4 170 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 TANGO2Q6ICL3 276 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 ABHD12BQ7Z5M8 362 aaPredicted RBP9.08□□□□□ -0.96
CLIP4-208ENST00000456385 SULF2Q8IWU5 870 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 OR51T1Q8NGJ9 327 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 MMABQ96EY8 250 aaPredicted RBP9.08□□□□□ -0.96
CLIP4-208ENST00000456385 GPER1Q99527 375 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 ZNF2Q9BSG1 426 aaPredicted RBP9.08□□□□□ -0.96
CLIP4-208ENST00000456385 EMC6Q9BV81 110 aa9.08□□□□□ -0.96
CLIP4-208ENST00000456385 TCEAL2Q9H3H9 227 aaPredicted RBP9.08□□□□□ -0.96
CLIP4-208ENST00000456385 ZNF701Q9NV72 531 aaPredicted RBP9.08□□□□□ -0.96
CLIP4-208ENST00000456385 EYSQ5T1H1 3165 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 BORCS7-ASMTA0A0B4J1R7 106 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 DHRS7CA6NNS2 312 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 CDRT15L2A8MXV6 281 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 ZNF878C9JN71 531 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 ZNF587BE7ETH6 402 aa9.07□□□□□ -0.96
CLIP4-208ENST00000456385 TERTO14746 1132 aaKnown RBP9.07□□□□□ -0.96
CLIP4-208ENST00000456385 IFNA21P01568 189 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms